Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 TP73-AS1-207ENST00000624167 988 ntBASIC11.51□□□□□ -0.57
AP1S3Q96PC3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 NUMA1-202ENST00000358965 7227 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 NBN-203ENST00000409330 4523 ntTSL 5 BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AP1S3Q96PC3 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 IGLL3P-201ENST00000412472 434 ntBASIC11.5□□□□□ -0.57
AP1S3Q96PC3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 AC023024.2-201ENST00000623561 1993 ntBASIC11.5□□□□□ -0.57
AP1S3Q96PC3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 GOLGA8CP-201ENST00000446144 5237 ntBASIC11.5□□□□□ -0.57
AP1S3Q96PC3 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 CACNA1C-205ENST00000399591 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 CACNA1C-206ENST00000399595 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 CACNA1C-207ENST00000399597 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 CACNA1C-208ENST00000399601 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 CACNA1C-217ENST00000399641 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 CACNA1C-218ENST00000399644 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
AP1S3Q96PC3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms