Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.34□□□□□ -0.27
AP3S1Q92572 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.34□□□□□ -0.27
AP3S1Q92572 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.34□□□□□ -0.27
AP3S1Q92572 RN7SL850P-201ENST00000579959 291 ntBASIC13.34□□□□□ -0.27
AP3S1Q92572 CLEC4GP1-201ENST00000596555 870 ntBASIC13.34□□□□□ -0.27
AP3S1Q92572 AC023141.13-201ENST00000604991 943 ntBASIC13.34□□□□□ -0.27
AP3S1Q92572 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.34□□□□□ -0.27
AP3S1Q92572 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
AP3S1Q92572 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.34□□□□□ -0.27
AP3S1Q92572 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
AP3S1Q92572 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.34□□□□□ -0.27
AP3S1Q92572 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S1Q92572 CSPG4P11-201ENST00000560634 4910 ntBASIC13.34□□□□□ -0.27
AP3S1Q92572 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.34□□□□□ -0.27
AP3S1Q92572 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S1Q92572 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
AP3S1Q92572 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S1Q92572 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
AP3S1Q92572 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S1Q92572 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S1Q92572 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S1Q92572 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
AP3S1Q92572 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
AP3S1Q92572 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.33□□□□□ -0.28
AP3S1Q92572 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
AP3S1Q92572 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
AP3S1Q92572 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
AP3S1Q92572 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.33□□□□□ -0.28
AP3S1Q92572 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
AP3S1Q92572 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.33□□□□□ -0.28
AP3S1Q92572 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.33□□□□□ -0.28
AP3S1Q92572 FAM220BP-201ENST00000377689 816 ntBASIC13.33□□□□□ -0.28
AP3S1Q92572 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.33□□□□□ -0.28
AP3S1Q92572 SAPCD2P3-201ENST00000455031 850 ntBASIC13.33□□□□□ -0.28
AP3S1Q92572 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.33□□□□□ -0.28
AP3S1Q92572 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.33□□□□□ -0.28
AP3S1Q92572 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 AC096734.2-201ENST00000562054 433 ntBASIC13.33□□□□□ -0.28
AP3S1Q92572 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.33□□□□□ -0.28
AP3S1Q92572 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.33□□□□□ -0.28
AP3S1Q92572 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.33□□□□□ -0.28
AP3S1Q92572 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.33□□□□□ -0.28
AP3S1Q92572 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
AP3S1Q92572 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
AP3S1Q92572 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
AP3S1Q92572 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.33□□□□□ -0.28
AP3S1Q92572 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
AP3S1Q92572 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
AP3S1Q92572 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
AP3S1Q92572 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.33□□□□□ -0.28
AP3S1Q92572 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.33□□□□□ -0.28
AP3S1Q92572 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.33□□□□□ -0.28
AP3S1Q92572 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S1Q92572 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.33□□□□□ -0.28
AP3S1Q92572 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
AP3S1Q92572 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.33□□□□□ -0.28
AP3S1Q92572 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AP3S1Q92572 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.32□□□□□ -0.28
AP3S1Q92572 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.32□□□□□ -0.28
AP3S1Q92572 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.32□□□□□ -0.28
AP3S1Q92572 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.32□□□□□ -0.28
AP3S1Q92572 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
AP3S1Q92572 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AP3S1Q92572 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
AP3S1Q92572 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AP3S1Q92572 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.32□□□□□ -0.28
AP3S1Q92572 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
AP3S1Q92572 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
AP3S1Q92572 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
AP3S1Q92572 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AP3S1Q92572 CR383656.2-201ENST00000548656 2254 ntBASIC13.32□□□□□ -0.28
AP3S1Q92572 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
AP3S1Q92572 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
AP3S1Q92572 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AP3S1Q92572 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.32□□□□□ -0.28
AP3S1Q92572 AP002414.3-201ENST00000589352 1468 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms