Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.45□□□□□ -0.1
SRFBP1Q8NEF9 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
SRFBP1Q8NEF9 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SRFBP1Q8NEF9 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SRFBP1Q8NEF9 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SRFBP1Q8NEF9 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 LINC00528-201ENST00000600723 2160 ntBASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 BAATP1-201ENST00000412284 1225 ntBASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 AC007389.4-201ENST00000454674 793 ntBASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 AC015936.2-201ENST00000593177 259 ntBASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 AJ011931.1-201ENST00000618749 2492 ntBASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SRFBP1Q8NEF9 FGD5P1-202ENST00000614866 2498 ntBASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 CU639417.3-201ENST00000624240 1404 ntBASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 AC012441.1-201ENST00000446669 685 ntBASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 RN7SL692P-201ENST00000464677 288 ntBASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.43□□□□□ -0.1
SRFBP1Q8NEF9 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms