Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHPFQ8IZ52 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
CHPFQ8IZ52 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CHPFQ8IZ52 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 AC104457.1-201ENST00000401024 814 ntBASIC15.35■□□□□ 0.05
CHPFQ8IZ52 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 IGHJ2P-201ENST00000454480 60 ntBASIC15.35■□□□□ 0.05
CHPFQ8IZ52 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 AC138466.3-201ENST00000619983 221 ntBASIC15.35■□□□□ 0.05
CHPFQ8IZ52 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 CLUHP2-201ENST00000426660 1303 ntBASIC15.35■□□□□ 0.05
CHPFQ8IZ52 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHPFQ8IZ52 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 HIST2H2BB-201ENST00000449108 381 ntBASIC15.34■□□□□ 0.05
CHPFQ8IZ52 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 AP003171.2-201ENST00000528208 925 ntBASIC15.34■□□□□ 0.05
CHPFQ8IZ52 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.34■□□□□ 0.05
CHPFQ8IZ52 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 AL360270.3-201ENST00000609118 1348 ntBASIC15.34■□□□□ 0.05
CHPFQ8IZ52 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms