Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 INGX-202ENST00000489074 768 ntBASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 AC007787.1-201ENST00000588095 1583 ntBASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 REXO1L4P-201ENST00000605109 1937 ntBASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 AC097493.3-201ENST00000509725 367 ntBASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 AC007967.4-201ENST00000614700 386 ntBASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 AJ011932.1-201ENST00000621707 465 ntBASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CRLF3Q8IUI8 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CRLF3Q8IUI8 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.14■□□□□ 0.01
CRLF3Q8IUI8 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CRLF3Q8IUI8 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CRLF3Q8IUI8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.14■□□□□ 0.01
CRLF3Q8IUI8 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.14■□□□□ 0.01
CRLF3Q8IUI8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.14■□□□□ 0.01
CRLF3Q8IUI8 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CRLF3Q8IUI8 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CRLF3Q8IUI8 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CRLF3Q8IUI8 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CRLF3Q8IUI8 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.14■□□□□ 0.01
CRLF3Q8IUI8 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CRLF3Q8IUI8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms