Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
COL23A1Q86Y22 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.52■□□□□ 0.55
COL23A1Q86Y22 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.52■□□□□ 0.55
COL23A1Q86Y22 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC18.51■□□□□ 0.55
COL23A1Q86Y22 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 CSNK1G2P1-201ENST00000442675 955 ntBASIC18.51■□□□□ 0.55
COL23A1Q86Y22 ERP29P1-201ENST00000442902 706 ntBASIC18.51■□□□□ 0.55
COL23A1Q86Y22 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 FTX-216ENST00000638985 1367 ntTSL 5 BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL23A1Q86Y22 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 MIR566-201ENST00000385187 94 ntBASIC18.5■□□□□ 0.55
COL23A1Q86Y22 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 AC073869.2-201ENST00000417338 1026 ntBASIC18.5■□□□□ 0.55
COL23A1Q86Y22 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 RPL18AP8-201ENST00000486071 528 ntBASIC18.5■□□□□ 0.55
COL23A1Q86Y22 AC093826.1-201ENST00000508655 993 ntBASIC18.5■□□□□ 0.55
COL23A1Q86Y22 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL23A1Q86Y22 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 AC010491.1-201ENST00000563101 2797 ntBASIC18.49■□□□□ 0.55
COL23A1Q86Y22 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL23A1Q86Y22 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms