Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 AP000769.1-203ENST00000637245 208 ntBASIC12.33□□□□□ -0.44
CSMD2Q7Z408 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CSMD2Q7Z408 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.32□□□□□ -0.44
CSMD2Q7Z408 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 KRT18P37-201ENST00000520711 1282 ntBASIC12.32□□□□□ -0.44
CSMD2Q7Z408 RN7SL357P-201ENST00000581065 298 ntBASIC12.32□□□□□ -0.44
CSMD2Q7Z408 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 AL391005.1-201ENST00000623953 2435 ntBASIC12.32□□□□□ -0.44
CSMD2Q7Z408 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD2Q7Z408 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 RNVU1-8-201ENST00000364272 125 ntBASIC12.31□□□□□ -0.44
CSMD2Q7Z408 MAGEA7P-201ENST00000436482 942 ntBASIC12.31□□□□□ -0.44
CSMD2Q7Z408 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 AC124068.2-201ENST00000569473 1109 ntBASIC12.31□□□□□ -0.44
CSMD2Q7Z408 AC006116.2-201ENST00000589958 988 ntBASIC12.31□□□□□ -0.44
CSMD2Q7Z408 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 AD000864.1-201ENST00000624076 2295 ntBASIC12.31□□□□□ -0.44
CSMD2Q7Z408 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD2Q7Z408 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms