Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 BCRP1-201ENST00000444246 691 ntBASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 SPCS2P1-201ENST00000561636 679 ntBASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 DUX4L47-201ENST00000566374 394 ntBASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 AL132655.2-201ENST00000596276 594 ntBASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 CHCHD2P3-201ENST00000603038 451 ntBASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST2H3AQ71DI3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 AC007541.1-201ENST00000570282 1469 ntBASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 API5-211ENST00000534695 560 ntTSL 5 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 AL359711.2-201ENST00000563105 872 ntBASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 SPDYE22P-201ENST00000582158 798 ntBASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 RN7SL204P-201ENST00000582831 262 ntBASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 LINC02560-201ENST00000596379 459 ntBASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 AC008761.3-201ENST00000624803 892 ntBASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 AC067750.1-201ENST00000608826 6545 ntBASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 KRT8P14-201ENST00000414254 1442 ntBASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST2H3AQ71DI3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 AL137783.1-201ENST00000623494 1896 ntBASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms