Protein–RNA interactions for Protein: Q6ZSC3

RBM43, RNA-binding protein 43, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM43Q6ZSC3 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.79■□□□□ 0.28
RBM43Q6ZSC3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RBM43Q6ZSC3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RBM43Q6ZSC3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 AC027612.1-201ENST00000445234 2395 ntBASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 AC211486.1-202ENST00000416371 468 ntBASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 UPF3AP3-201ENST00000420996 769 ntBASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 CNN2P11-201ENST00000429351 262 ntBASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 AC211476.1-201ENST00000503899 468 ntBASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 AC069120.2-201ENST00000524091 540 ntBASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 AC027369.6-201ENST00000525520 931 ntBASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 AC009407.1-201ENST00000568958 598 ntBASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 AL049840.4-201ENST00000602422 811 ntBASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 AC093813.1-201ENST00000605066 256 ntBASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RBM43Q6ZSC3 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 CNN2P2-201ENST00000443536 909 ntBASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 CNN2P3-201ENST00000450201 906 ntBASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 AC140878.1-201ENST00000565277 250 ntBASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 SRD5A3P1-201ENST00000603021 949 ntBASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 AL136317.3-201ENST00000618497 906 ntBASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 AL590560.3-201ENST00000623350 461 ntBASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 AL603764.1-201ENST00000636452 321 ntBASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RBM43Q6ZSC3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
RBM43Q6ZSC3 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC16.77■□□□□ 0.27
RBM43Q6ZSC3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RBM43Q6ZSC3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RBM43Q6ZSC3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RBM43Q6ZSC3 AC100757.3-201ENST00000622361 1406 ntBASIC16.77■□□□□ 0.27
RBM43Q6ZSC3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RBM43Q6ZSC3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
RBM43Q6ZSC3 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RBM43Q6ZSC3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.77■□□□□ 0.27
RBM43Q6ZSC3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RBM43Q6ZSC3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms