Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 AL691432.1-201ENST00000596308 1422 ntBASIC12.54□□□□□ -0.4
TREML4Q6UXN2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 AC099548.2-209ENST00000480264 625 ntBASIC12.54□□□□□ -0.4
TREML4Q6UXN2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 AC097487.1-201ENST00000514134 934 ntTSL 3 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 SDHAP3-202ENST00000515467 728 ntBASIC12.54□□□□□ -0.4
TREML4Q6UXN2 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 AC092451.2-201ENST00000538746 658 ntBASIC12.54□□□□□ -0.4
TREML4Q6UXN2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 AL109741.3-201ENST00000561748 592 ntBASIC12.54□□□□□ -0.4
TREML4Q6UXN2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 BTNL10-201ENST00000595971 695 ntBASIC12.54□□□□□ -0.4
TREML4Q6UXN2 AC146944.4-201ENST00000602697 718 ntBASIC12.54□□□□□ -0.4
TREML4Q6UXN2 WFDC1-204ENST00000613603 549 ntBASIC12.54□□□□□ -0.4
TREML4Q6UXN2 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.54□□□□□ -0.4
TREML4Q6UXN2 AC022306.2-201ENST00000617563 647 ntBASIC12.54□□□□□ -0.4
TREML4Q6UXN2 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 TUBB1P2-201ENST00000422712 1306 ntBASIC12.54□□□□□ -0.4
TREML4Q6UXN2 TUBB1P1-201ENST00000503144 1300 ntBASIC12.54□□□□□ -0.4
TREML4Q6UXN2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TREML4Q6UXN2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 RPS20P25-201ENST00000412447 352 ntBASIC12.53□□□□□ -0.4
TREML4Q6UXN2 MTND2P15-201ENST00000418575 892 ntBASIC12.53□□□□□ -0.4
TREML4Q6UXN2 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 MTCYBP11-201ENST00000447254 1109 ntBASIC12.53□□□□□ -0.4
TREML4Q6UXN2 KLF2P4-201ENST00000451959 1225 ntBASIC12.53□□□□□ -0.4
TREML4Q6UXN2 CTBP2P5-201ENST00000454986 1264 ntBASIC12.53□□□□□ -0.4
TREML4Q6UXN2 AL022319.1-201ENST00000458183 1167 ntBASIC12.53□□□□□ -0.4
TREML4Q6UXN2 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.53□□□□□ -0.4
TREML4Q6UXN2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms