Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 RNA5SP359-201ENST00000364838 113 ntBASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 AC012362.1-201ENST00000434906 739 ntBASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 AC018463.1-201ENST00000456674 917 ntBASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 KRT8P31-201ENST00000504812 1408 ntBASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 AC007326.1-201ENST00000604539 458 ntBASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 MIR6858-201ENST00000620733 67 ntBASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 TMBIM7P-202ENST00000641474 1516 ntBASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNKSR3Q6P9H4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 AL513523.2-202ENST00000427283 2040 ntBASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 Z69890.1-201ENST00000382990 339 ntBASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 PIN4P1-201ENST00000451079 396 ntBASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 RN7SL81P-201ENST00000493781 261 ntBASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 AC114947.1-202ENST00000514136 344 ntBASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNKSR3Q6P9H4 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNKSR3Q6P9H4 KRT18P66-201ENST00000452970 1269 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms