Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 LILRP1-201ENST00000444199 1370 ntBASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 DNM1P30-201ENST00000563586 452 ntBASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 AC007881.3-201ENST00000608897 607 ntBASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 SALL4P5-201ENST00000419001 1760 ntBASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LYSMD4Q5XG99 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 AL583805.1-201ENST00000391389 531 ntBASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 AL512430.1-201ENST00000392575 860 ntBASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 AP000358.1-201ENST00000456260 156 ntBASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 AC005632.3-201ENST00000605544 308 ntBASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 MEG3_2.1-201ENST00000611456 105 ntBASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 MIR6842-201ENST00000612539 65 ntBASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 AC025271.4-201ENST00000621477 1726 ntBASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD4Q5XG99 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD4Q5XG99 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.62□□□□□ -0.07
LYSMD4Q5XG99 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD4Q5XG99 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD4Q5XG99 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.62□□□□□ -0.07
LYSMD4Q5XG99 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.62□□□□□ -0.07
LYSMD4Q5XG99 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms