Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 PPP1R2P4-201ENST00000424051 595 ntBASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 SCARNA12-201ENST00000459155 270 ntBASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 RN7SL396P-201ENST00000471086 295 ntBASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 AL157792.1-201ENST00000488281 530 ntBASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 DBP-202ENST00000593500 712 ntTSL 2 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 SIGLEC22P-201ENST00000599104 714 ntBASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 USP4-203ENST00000415188 1454 ntTSL 3 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 AC020763.4-201ENST00000623414 4170 ntBASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 MIR1227-201ENST00000408484 88 ntBASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 ALG1L6P-201ENST00000515248 758 ntBASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 RN7SL470P-201ENST00000583069 259 ntBASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CDC42BPAQ5VT25 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDC42BPAQ5VT25 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDC42BPAQ5VT25 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDC42BPAQ5VT25 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC22.08■■□□□ 1.13
CDC42BPAQ5VT25 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDC42BPAQ5VT25 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDC42BPAQ5VT25 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDC42BPAQ5VT25 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
CDC42BPAQ5VT25 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
CDC42BPAQ5VT25 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDC42BPAQ5VT25 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDC42BPAQ5VT25 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDC42BPAQ5VT25 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CDC42BPAQ5VT25 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CDC42BPAQ5VT25 RPS23-204ENST00000507980 836 ntTSL 2 BASIC22.08■■□□□ 1.12
CDC42BPAQ5VT25 AC095040.1-201ENST00000513286 675 ntBASIC22.08■■□□□ 1.12
CDC42BPAQ5VT25 ALG1L13P-202ENST00000519320 584 ntBASIC22.08■■□□□ 1.12
CDC42BPAQ5VT25 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC22.08■■□□□ 1.12
CDC42BPAQ5VT25 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
CDC42BPAQ5VT25 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 AGGF1P1-201ENST00000509500 2073 ntBASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 REEP5-205ENST00000504247 480 ntTSL 5 BASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 AP000322.3-201ENST00000608665 388 ntBASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 AC015688.4-201ENST00000580780 1647 ntBASIC22.07■■□□□ 1.12
CDC42BPAQ5VT25 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 AC067931.2-201ENST00000623655 2003 ntBASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 AC010234.1-201ENST00000494599 870 ntBASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 AC068867.1-201ENST00000559855 150 ntBASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms