Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC14.36□□□□□ -0.11
RIF1Q5UIP0 AC020922.4-201ENST00000621389 339 ntBASIC14.36□□□□□ -0.11
RIF1Q5UIP0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIF1Q5UIP0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIF1Q5UIP0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RIF1Q5UIP0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RIF1Q5UIP0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIF1Q5UIP0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
RIF1Q5UIP0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RIF1Q5UIP0 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RIF1Q5UIP0 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIF1Q5UIP0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RIF1Q5UIP0 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.36□□□□□ -0.11
RIF1Q5UIP0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 PIFO-201ENST00000369737 746 ntTSL 2 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 ERP29P1-201ENST00000442902 706 ntBASIC14.35□□□□□ -0.11
RIF1Q5UIP0 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 TPT1P6-201ENST00000458298 514 ntBASIC14.35□□□□□ -0.11
RIF1Q5UIP0 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 OR2A1-AS1-210ENST00000496968 531 ntBASIC14.35□□□□□ -0.11
RIF1Q5UIP0 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 AL022334.2-201ENST00000610000 484 ntBASIC14.35□□□□□ -0.11
RIF1Q5UIP0 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 AC027601.3-201ENST00000622907 509 ntBASIC14.35□□□□□ -0.11
RIF1Q5UIP0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 GNG10P1-201ENST00000452289 199 ntBASIC14.35□□□□□ -0.11
RIF1Q5UIP0 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 AC006122.1-201ENST00000493323 440 ntBASIC14.35□□□□□ -0.11
RIF1Q5UIP0 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 ST5-261ENST00000626808 1071 ntTSL 5 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RIF1Q5UIP0 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 CASP2-203ENST00000392925 616 ntTSL 3 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 AC026412.1-206ENST00000502273 206 ntBASIC14.34□□□□□ -0.11
RIF1Q5UIP0 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 APOC1-209ENST00000592885 562 ntTSL 3 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 AL118522.1-201ENST00000611368 560 ntBASIC14.34□□□□□ -0.11
RIF1Q5UIP0 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms