Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC004899.1-201ENST00000424687 1714 ntBASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 SHC1P1-201ENST00000425230 1745 ntBASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 TMBIM7P-203ENST00000641617 1718 ntBASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RNFT1Q5M7Z0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
RNFT1Q5M7Z0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNFT1Q5M7Z0 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RNFT1Q5M7Z0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RNFT1Q5M7Z0 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNFT1Q5M7Z0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNFT1Q5M7Z0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RNFT1Q5M7Z0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RNFT1Q5M7Z0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
RNFT1Q5M7Z0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNFT1Q5M7Z0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNFT1Q5M7Z0 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNFT1Q5M7Z0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNFT1Q5M7Z0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNFT1Q5M7Z0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.24
RNFT1Q5M7Z0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNFT1Q5M7Z0 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 AL662890.1-201ENST00000396818 632 ntBASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 AC010141.1-201ENST00000411585 623 ntBASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 AC005740.2-201ENST00000511085 419 ntBASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 MIR3619-201ENST00000579667 83 ntBASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 AL645939.5-201ENST00000606834 243 ntBASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 AC138627.1-207ENST00000641560 1006 ntBASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 AC004923.1-202ENST00000642106 209 ntBASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 AC126365.1-201ENST00000578585 1514 ntBASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNFT1Q5M7Z0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 MROH4P-201ENST00000431302 1578 ntBASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 AC003102.2-201ENST00000589195 1469 ntBASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 AC105129.2-201ENST00000559536 390 ntBASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 AC100827.2-201ENST00000563214 1194 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms