Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
USH1GQ495M9 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
USH1GQ495M9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
USH1GQ495M9 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
USH1GQ495M9 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.26■□□□□ 0.35
USH1GQ495M9 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.26■□□□□ 0.35
USH1GQ495M9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.26■□□□□ 0.35
USH1GQ495M9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
USH1GQ495M9 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.26■□□□□ 0.35
USH1GQ495M9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.26■□□□□ 0.35
USH1GQ495M9 TSPY26P-202ENST00000565928 3884 ntBASIC17.26■□□□□ 0.35
USH1GQ495M9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 MIR1247-201ENST00000408206 136 ntBASIC17.26■□□□□ 0.35
USH1GQ495M9 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
USH1GQ495M9 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.26■□□□□ 0.35
USH1GQ495M9 AC100850.1-201ENST00000506768 649 ntBASIC17.26■□□□□ 0.35
USH1GQ495M9 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.26■□□□□ 0.35
USH1GQ495M9 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.26■□□□□ 0.35
USH1GQ495M9 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.26■□□□□ 0.35
USH1GQ495M9 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.26■□□□□ 0.35
USH1GQ495M9 AC138696.2-201ENST00000607376 223 ntBASIC17.26■□□□□ 0.35
USH1GQ495M9 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.26■□□□□ 0.35
USH1GQ495M9 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.26■□□□□ 0.35
USH1GQ495M9 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.26■□□□□ 0.35
USH1GQ495M9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.26■□□□□ 0.35
USH1GQ495M9 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
USH1GQ495M9 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.26■□□□□ 0.35
USH1GQ495M9 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 AC018735.1-201ENST00000437208 1502 ntBASIC17.26■□□□□ 0.35
USH1GQ495M9 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.26■□□□□ 0.35
USH1GQ495M9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USH1GQ495M9 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.26■□□□□ 0.35
USH1GQ495M9 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.26■□□□□ 0.35
USH1GQ495M9 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
USH1GQ495M9 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.25■□□□□ 0.35
USH1GQ495M9 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
USH1GQ495M9 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.25■□□□□ 0.35
USH1GQ495M9 RN7SKP230-201ENST00000365642 335 ntBASIC17.25■□□□□ 0.35
USH1GQ495M9 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.25■□□□□ 0.35
USH1GQ495M9 MIR663B-201ENST00000408361 115 ntBASIC17.25■□□□□ 0.35
USH1GQ495M9 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.25■□□□□ 0.35
USH1GQ495M9 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.25■□□□□ 0.35
USH1GQ495M9 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.25■□□□□ 0.35
USH1GQ495M9 MIR3615-201ENST00000581999 87 ntBASIC17.25■□□□□ 0.35
USH1GQ495M9 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
USH1GQ495M9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
USH1GQ495M9 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USH1GQ495M9 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.25■□□□□ 0.35
USH1GQ495M9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USH1GQ495M9 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
USH1GQ495M9 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USH1GQ495M9 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.24■□□□□ 0.35
USH1GQ495M9 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USH1GQ495M9 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
USH1GQ495M9 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USH1GQ495M9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.24■□□□□ 0.35
USH1GQ495M9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
USH1GQ495M9 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USH1GQ495M9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USH1GQ495M9 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USH1GQ495M9 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms