Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 MIR346-201ENST00000362234 95 ntBASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 TFAMP1-201ENST00000412727 736 ntBASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 GPALPP1-207ENST00000611650 899 ntBASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 AL645728.2-202ENST00000641679 227 ntBASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 AL356585.2-201ENST00000625078 2396 ntBASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 KRT8P24-201ENST00000560290 1559 ntBASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
ANKRD55Q3KP44 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
ANKRD55Q3KP44 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.58□□□□□ -0.39
ANKRD55Q3KP44 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.58□□□□□ -0.39
ANKRD55Q3KP44 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
ANKRD55Q3KP44 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 AL355306.1-201ENST00000415580 579 ntBASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 AC025181.2-201ENST00000606994 802 ntBASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 AL513190.1-201ENST00000621254 727 ntBASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms