Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TSR1Q2NL82 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TSR1Q2NL82 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TSR1Q2NL82 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TSR1Q2NL82 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TSR1Q2NL82 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TSR1Q2NL82 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TSR1Q2NL82 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TSR1Q2NL82 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TSR1Q2NL82 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TSR1Q2NL82 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TSR1Q2NL82 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TSR1Q2NL82 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 FAM58DP-201ENST00000428076 619 ntBASIC16.66■□□□□ 0.26
TSR1Q2NL82 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 AL589739.1-201ENST00000607720 493 ntBASIC16.66■□□□□ 0.26
TSR1Q2NL82 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 AL034417.3-201ENST00000641100 1043 ntBASIC16.66■□□□□ 0.26
TSR1Q2NL82 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TSR1Q2NL82 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TSR1Q2NL82 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 Z97205.2-201ENST00000564697 1639 ntBASIC16.66■□□□□ 0.26
TSR1Q2NL82 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TSR1Q2NL82 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TSR1Q2NL82 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC16.66■□□□□ 0.26
TSR1Q2NL82 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.65■□□□□ 0.26
TSR1Q2NL82 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 AL627223.1-201ENST00000416693 442 ntBASIC16.65■□□□□ 0.26
TSR1Q2NL82 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 AC137695.1-201ENST00000604126 489 ntBASIC16.65■□□□□ 0.26
TSR1Q2NL82 AL596442.2-201ENST00000610240 980 ntBASIC16.65■□□□□ 0.26
TSR1Q2NL82 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.65■□□□□ 0.26
TSR1Q2NL82 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 CETN4P-206ENST00000642099 2168 ntBASIC16.65■□□□□ 0.26
TSR1Q2NL82 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 AL731571.1-201ENST00000617058 5428 ntBASIC16.65■□□□□ 0.26
TSR1Q2NL82 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TSR1Q2NL82 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.65■□□□□ 0.26
TSR1Q2NL82 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TSR1Q2NL82 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TSR1Q2NL82 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TSR1Q2NL82 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms