Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC6LQ2NKX8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 CETP-203ENST00000566128 1733 ntTSL 5 BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 AC104457.1-201ENST00000401024 814 ntBASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 IGLL3P-201ENST00000412472 434 ntBASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 AC004945.1-201ENST00000416738 983 ntBASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 FAAHP1-202ENST00000446499 1238 ntBASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 EMBP1-201ENST00000458200 901 ntBASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 AL121912.1-201ENST00000603683 238 ntBASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 PCDHB18P-202ENST00000526308 3197 ntBASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 AC020910.6-201ENST00000623084 1459 ntBASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC16.03■□□□□ 0.16
ERCC6LQ2NKX8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 RNA5SP410-201ENST00000516285 106 ntBASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 KRT126P-201ENST00000549467 1181 ntBASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 AC105339.3-201ENST00000560043 636 ntBASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 MIR4751-201ENST00000578027 74 ntBASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC6LQ2NKX8 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
ERCC6LQ2NKX8 TCAM1P-207ENST00000485295 1537 ntBASIC16.02■□□□□ 0.15
ERCC6LQ2NKX8 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC6LQ2NKX8 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC6LQ2NKX8 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC6LQ2NKX8 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC6LQ2NKX8 TNN-202ENST00000621086 4234 ntTSL 5 BASIC16.02■□□□□ 0.15
ERCC6LQ2NKX8 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC6LQ2NKX8 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.15
ERCC6LQ2NKX8 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms