Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC17■□□□□ 0.31
HTRA3P83110 COQ4-204ENST00000608951 781 ntTSL 2 BASIC17■□□□□ 0.31
HTRA3P83110 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
HTRA3P83110 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17■□□□□ 0.31
HTRA3P83110 AC112504.1-201ENST00000623415 1841 ntBASIC17■□□□□ 0.31
HTRA3P83110 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTRA3P83110 TNRC18P3-201ENST00000441896 2691 ntBASIC17■□□□□ 0.31
HTRA3P83110 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
HTRA3P83110 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16.99■□□□□ 0.31
HTRA3P83110 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.99■□□□□ 0.31
HTRA3P83110 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
HTRA3P83110 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HTRA3P83110 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 MIR611-201ENST00000384869 67 ntBASIC16.99■□□□□ 0.31
HTRA3P83110 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.99■□□□□ 0.31
HTRA3P83110 FDPSP7-201ENST00000429043 1054 ntBASIC16.99■□□□□ 0.31
HTRA3P83110 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC16.99■□□□□ 0.31
HTRA3P83110 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.99■□□□□ 0.31
HTRA3P83110 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 AC007679.1-201ENST00000458609 502 ntBASIC16.99■□□□□ 0.31
HTRA3P83110 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC16.99■□□□□ 0.31
HTRA3P83110 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC16.99■□□□□ 0.31
HTRA3P83110 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC16.99■□□□□ 0.31
HTRA3P83110 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.99■□□□□ 0.31
HTRA3P83110 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.99■□□□□ 0.31
HTRA3P83110 TPST2P1-201ENST00000564073 1102 ntBASIC16.99■□□□□ 0.31
HTRA3P83110 CLPP-205ENST00000596605 646 ntTSL 2 BASIC16.99■□□□□ 0.31
HTRA3P83110 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
HTRA3P83110 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC16.99■□□□□ 0.31
HTRA3P83110 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC16.99■□□□□ 0.31
HTRA3P83110 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC16.99■□□□□ 0.31
HTRA3P83110 AC005274.1-201ENST00000623460 802 ntBASIC16.99■□□□□ 0.31
HTRA3P83110 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.99■□□□□ 0.31
HTRA3P83110 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 AC003102.2-201ENST00000589195 1469 ntBASIC16.99■□□□□ 0.31
HTRA3P83110 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HTRA3P83110 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HTRA3P83110 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HTRA3P83110 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTRA3P83110 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HTRA3P83110 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
HTRA3P83110 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTRA3P83110 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTRA3P83110 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTRA3P83110 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.98■□□□□ 0.31
HTRA3P83110 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.98■□□□□ 0.31
HTRA3P83110 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
HTRA3P83110 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.98■□□□□ 0.31
HTRA3P83110 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HTRA3P83110 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
HTRA3P83110 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC16.98■□□□□ 0.31
HTRA3P83110 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HTRA3P83110 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.98■□□□□ 0.31
HTRA3P83110 AC007881.1-201ENST00000437460 187 ntBASIC16.98■□□□□ 0.31
HTRA3P83110 CDKN2A-AS1-201ENST00000441769 823 ntBASIC16.98■□□□□ 0.31
HTRA3P83110 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
HTRA3P83110 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC16.98■□□□□ 0.31
HTRA3P83110 PFN2-212ENST00000490975 858 ntTSL 4 BASIC16.98■□□□□ 0.31
HTRA3P83110 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC16.98■□□□□ 0.31
HTRA3P83110 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC16.98■□□□□ 0.31
HTRA3P83110 AC004801.1-201ENST00000549557 360 ntBASIC16.98■□□□□ 0.31
HTRA3P83110 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC16.98■□□□□ 0.31
HTRA3P83110 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC16.98■□□□□ 0.31
HTRA3P83110 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC16.98■□□□□ 0.31
HTRA3P83110 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.98■□□□□ 0.31
HTRA3P83110 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.98■□□□□ 0.31
HTRA3P83110 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTRA3P83110 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HTRA3P83110 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTRA3P83110 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTRA3P83110 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTRA3P83110 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTRA3P83110 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTRA3P83110 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTRA3P83110 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTRA3P83110 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTRA3P83110 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
HTRA3P83110 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HTRA3P83110 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTRA3P83110 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms