Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.36□□□□□ -0.11
SKP1P63208 ENPP7P14-201ENST00000621765 1040 ntBASIC14.36□□□□□ -0.11
SKP1P63208 REXO1L2P-201ENST00000425429 2069 ntBASIC14.36□□□□□ -0.11
SKP1P63208 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SKP1P63208 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SKP1P63208 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SKP1P63208 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SKP1P63208 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SKP1P63208 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SKP1P63208 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
SKP1P63208 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.36□□□□□ -0.11
SKP1P63208 AC144831.1-201ENST00000573312 2656 ntBASIC14.36□□□□□ -0.11
SKP1P63208 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SKP1P63208 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.36□□□□□ -0.11
SKP1P63208 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.36□□□□□ -0.11
SKP1P63208 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.36□□□□□ -0.11
SKP1P63208 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.36□□□□□ -0.11
SKP1P63208 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SKP1P63208 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.35□□□□□ -0.11
SKP1P63208 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SKP1P63208 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SKP1P63208 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SKP1P63208 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.35□□□□□ -0.11
SKP1P63208 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SKP1P63208 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SKP1P63208 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SKP1P63208 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SKP1P63208 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SKP1P63208 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SKP1P63208 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SKP1P63208 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SKP1P63208 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SKP1P63208 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.35□□□□□ -0.11
SKP1P63208 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SKP1P63208 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.35□□□□□ -0.11
SKP1P63208 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.35□□□□□ -0.11
SKP1P63208 CD8B2-202ENST00000417670 633 ntBASIC14.35□□□□□ -0.11
SKP1P63208 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SKP1P63208 AC007551.1-201ENST00000457394 519 ntBASIC14.35□□□□□ -0.11
SKP1P63208 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SKP1P63208 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.35□□□□□ -0.11
SKP1P63208 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.35□□□□□ -0.11
SKP1P63208 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SKP1P63208 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SKP1P63208 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.35□□□□□ -0.11
SKP1P63208 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.35□□□□□ -0.11
SKP1P63208 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SKP1P63208 AL137783.1-201ENST00000623494 1896 ntBASIC14.35□□□□□ -0.11
SKP1P63208 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.35□□□□□ -0.11
SKP1P63208 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SKP1P63208 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SKP1P63208 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.35□□□□□ -0.11
SKP1P63208 MSTO2P-201ENST00000314835 1709 ntBASIC14.35□□□□□ -0.11
SKP1P63208 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SKP1P63208 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SKP1P63208 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
SKP1P63208 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.34□□□□□ -0.11
SKP1P63208 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.34□□□□□ -0.11
SKP1P63208 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.34□□□□□ -0.11
SKP1P63208 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 AC013268.4-201ENST00000637413 2228 ntBASIC14.34□□□□□ -0.11
SKP1P63208 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SKP1P63208 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.34□□□□□ -0.11
SKP1P63208 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SKP1P63208 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
SKP1P63208 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.34□□□□□ -0.11
SKP1P63208 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
SKP1P63208 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.34□□□□□ -0.11
SKP1P63208 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 KLF2P4-201ENST00000451959 1225 ntBASIC14.34□□□□□ -0.11
SKP1P63208 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.34□□□□□ -0.11
SKP1P63208 RNA5SP486-201ENST00000515961 83 ntBASIC14.34□□□□□ -0.11
SKP1P63208 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SKP1P63208 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.34□□□□□ -0.11
SKP1P63208 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.34□□□□□ -0.11
SKP1P63208 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SKP1P63208 AC017083.2-201ENST00000608069 979 ntBASIC14.34□□□□□ -0.11
SKP1P63208 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.34□□□□□ -0.11
SKP1P63208 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.34□□□□□ -0.11
SKP1P63208 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SKP1P63208 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.34□□□□□ -0.11
SKP1P63208 AL157414.3-201ENST00000624276 1954 ntBASIC14.34□□□□□ -0.11
SKP1P63208 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.34□□□□□ -0.11
SKP1P63208 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.34□□□□□ -0.11
SKP1P63208 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
SKP1P63208 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms