Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.16■□□□□ 0.02
AP1S1P61966 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
AP1S1P61966 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S1P61966 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.16■□□□□ 0.02
AP1S1P61966 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
AP1S1P61966 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S1P61966 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S1P61966 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.16■□□□□ 0.02
AP1S1P61966 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.16■□□□□ 0.02
AP1S1P61966 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S1P61966 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
AP1S1P61966 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
AP1S1P61966 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
AP1S1P61966 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP1S1P61966 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.16■□□□□ 0.02
AP1S1P61966 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
AP1S1P61966 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.15■□□□□ 0.02
AP1S1P61966 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.15■□□□□ 0.02
AP1S1P61966 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.15■□□□□ 0.02
AP1S1P61966 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S1P61966 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S1P61966 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S1P61966 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S1P61966 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S1P61966 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.15■□□□□ 0.02
AP1S1P61966 HLA-V-201ENST00000429037 534 ntBASIC15.15■□□□□ 0.02
AP1S1P61966 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S1P61966 CSF2RBP1-201ENST00000447905 391 ntBASIC15.15■□□□□ 0.02
AP1S1P61966 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.15■□□□□ 0.02
AP1S1P61966 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.15■□□□□ 0.02
AP1S1P61966 AL391280.1-201ENST00000506969 1062 ntBASIC15.15■□□□□ 0.02
AP1S1P61966 COX5BP1-201ENST00000507622 393 ntBASIC15.15■□□□□ 0.02
AP1S1P61966 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.15■□□□□ 0.02
AP1S1P61966 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.15■□□□□ 0.02
AP1S1P61966 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S1P61966 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.15■□□□□ 0.02
AP1S1P61966 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.15■□□□□ 0.02
AP1S1P61966 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.15■□□□□ 0.02
AP1S1P61966 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.15■□□□□ 0.02
AP1S1P61966 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 SALL4P5-201ENST00000419001 1760 ntBASIC15.15■□□□□ 0.02
AP1S1P61966 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S1P61966 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
AP1S1P61966 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.15■□□□□ 0.02
AP1S1P61966 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S1P61966 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S1P61966 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.15■□□□□ 0.02
AP1S1P61966 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S1P61966 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.15■□□□□ 0.02
AP1S1P61966 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S1P61966 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
AP1S1P61966 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S1P61966 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S1P61966 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S1P61966 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S1P61966 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S1P61966 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.14■□□□□ 0.01
AP1S1P61966 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S1P61966 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S1P61966 AC011840.2-201ENST00000563063 1520 ntBASIC15.14■□□□□ 0.01
AP1S1P61966 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
AP1S1P61966 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S1P61966 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S1P61966 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.14■□□□□ 0.01
AP1S1P61966 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S1P61966 RN7SKP230-201ENST00000365642 335 ntBASIC15.14■□□□□ 0.01
AP1S1P61966 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.14■□□□□ 0.01
AP1S1P61966 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
AP1S1P61966 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.14■□□□□ 0.01
AP1S1P61966 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S1P61966 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.14■□□□□ 0.01
AP1S1P61966 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S1P61966 YBX1P6-201ENST00000442962 1002 ntBASIC15.14■□□□□ 0.01
AP1S1P61966 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.14■□□□□ 0.01
AP1S1P61966 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.14■□□□□ 0.01
AP1S1P61966 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.14■□□□□ 0.01
AP1S1P61966 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.14■□□□□ 0.01
AP1S1P61966 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.14■□□□□ 0.01
AP1S1P61966 RN7SL713P-201ENST00000582127 302 ntBASIC15.14■□□□□ 0.01
AP1S1P61966 MIR4259-201ENST00000584466 101 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms