Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
SPCS3P61009 KRT18P32-201ENST00000424695 1287 ntBASIC12.38□□□□□ -0.43
SPCS3P61009 HTR5BP-201ENST00000430851 1154 ntBASIC12.38□□□□□ -0.43
SPCS3P61009 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.38□□□□□ -0.43
SPCS3P61009 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.38□□□□□ -0.43
SPCS3P61009 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SPCS3P61009 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.38□□□□□ -0.43
SPCS3P61009 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.38□□□□□ -0.43
SPCS3P61009 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.38□□□□□ -0.43
SPCS3P61009 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
SPCS3P61009 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.38□□□□□ -0.43
SPCS3P61009 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.38□□□□□ -0.43
SPCS3P61009 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.38□□□□□ -0.43
SPCS3P61009 AL133215.2-201ENST00000609242 977 ntBASIC12.38□□□□□ -0.43
SPCS3P61009 AC007967.4-201ENST00000614700 386 ntBASIC12.38□□□□□ -0.43
SPCS3P61009 MIR6069-201ENST00000620069 79 ntBASIC12.38□□□□□ -0.43
SPCS3P61009 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 AC113367.3-201ENST00000508316 1912 ntBASIC12.38□□□□□ -0.43
SPCS3P61009 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.38□□□□□ -0.43
SPCS3P61009 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.38□□□□□ -0.43
SPCS3P61009 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SPCS3P61009 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.38□□□□□ -0.43
SPCS3P61009 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SPCS3P61009 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.38□□□□□ -0.43
SPCS3P61009 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SPCS3P61009 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
SPCS3P61009 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SPCS3P61009 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPCS3P61009 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SPCS3P61009 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SPCS3P61009 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SPCS3P61009 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
SPCS3P61009 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SPCS3P61009 MTHFR-210ENST00000641407 2387 ntBASIC12.37□□□□□ -0.43
SPCS3P61009 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.37□□□□□ -0.43
SPCS3P61009 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.37□□□□□ -0.43
SPCS3P61009 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SPCS3P61009 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.37□□□□□ -0.43
SPCS3P61009 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SPCS3P61009 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
SPCS3P61009 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.37□□□□□ -0.43
SPCS3P61009 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SPCS3P61009 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
SPCS3P61009 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.37□□□□□ -0.43
SPCS3P61009 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.37□□□□□ -0.43
SPCS3P61009 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SPCS3P61009 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SPCS3P61009 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.37□□□□□ -0.43
SPCS3P61009 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.37□□□□□ -0.43
SPCS3P61009 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SPCS3P61009 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.37□□□□□ -0.43
SPCS3P61009 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SPCS3P61009 AC104457.1-201ENST00000401024 814 ntBASIC12.37□□□□□ -0.43
SPCS3P61009 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SPCS3P61009 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.37□□□□□ -0.43
SPCS3P61009 AC004832.2-201ENST00000426397 482 ntBASIC12.37□□□□□ -0.43
SPCS3P61009 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.37□□□□□ -0.43
SPCS3P61009 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.37□□□□□ -0.43
SPCS3P61009 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.37□□□□□ -0.43
SPCS3P61009 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.37□□□□□ -0.43
SPCS3P61009 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.37□□□□□ -0.43
SPCS3P61009 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms