Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
AP3S2P59780 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S2P59780 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S2P59780 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S2P59780 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S2P59780 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S2P59780 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S2P59780 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S2P59780 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.01□□□□□ -0.33
AP3S2P59780 AC104457.1-201ENST00000401024 814 ntBASIC13.01□□□□□ -0.33
AP3S2P59780 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S2P59780 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S2P59780 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.01□□□□□ -0.33
AP3S2P59780 AC093827.2-201ENST00000512654 315 ntBASIC13.01□□□□□ -0.33
AP3S2P59780 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.01□□□□□ -0.33
AP3S2P59780 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
AP3S2P59780 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.01□□□□□ -0.33
AP3S2P59780 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.01□□□□□ -0.33
AP3S2P59780 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.01□□□□□ -0.33
AP3S2P59780 RN7SL850P-201ENST00000579959 291 ntBASIC13.01□□□□□ -0.33
AP3S2P59780 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.01□□□□□ -0.33
AP3S2P59780 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.01□□□□□ -0.33
AP3S2P59780 LINC01711-201ENST00000598340 967 ntBASIC13.01□□□□□ -0.33
AP3S2P59780 AC023141.13-201ENST00000604991 943 ntBASIC13.01□□□□□ -0.33
AP3S2P59780 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S2P59780 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S2P59780 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
AP3S2P59780 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
AP3S2P59780 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.01□□□□□ -0.33
AP3S2P59780 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.01□□□□□ -0.33
AP3S2P59780 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S2P59780 AGGF1P1-201ENST00000509500 2073 ntBASIC13.01□□□□□ -0.33
AP3S2P59780 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S2P59780 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S2P59780 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S2P59780 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S2P59780 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S2P59780 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
AP3S2P59780 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S2P59780 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S2P59780 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S2P59780 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S2P59780 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
AP3S2P59780 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13□□□□□ -0.33
AP3S2P59780 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
AP3S2P59780 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
AP3S2P59780 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13□□□□□ -0.33
AP3S2P59780 AC090505.1-201ENST00000430515 1834 ntBASIC13□□□□□ -0.33
AP3S2P59780 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13□□□□□ -0.33
AP3S2P59780 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
AP3S2P59780 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
AP3S2P59780 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13□□□□□ -0.33
AP3S2P59780 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13□□□□□ -0.33
AP3S2P59780 FAM220BP-201ENST00000377689 816 ntBASIC13□□□□□ -0.33
AP3S2P59780 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13□□□□□ -0.33
AP3S2P59780 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13□□□□□ -0.33
AP3S2P59780 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13□□□□□ -0.33
AP3S2P59780 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13□□□□□ -0.33
AP3S2P59780 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13□□□□□ -0.33
AP3S2P59780 AC096734.2-201ENST00000562054 433 ntBASIC13□□□□□ -0.33
AP3S2P59780 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13□□□□□ -0.33
AP3S2P59780 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13□□□□□ -0.33
AP3S2P59780 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13□□□□□ -0.33
AP3S2P59780 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13□□□□□ -0.33
AP3S2P59780 CLEC4GP1-201ENST00000596555 870 ntBASIC13□□□□□ -0.33
AP3S2P59780 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13□□□□□ -0.33
AP3S2P59780 AP000550.4-202ENST00000639755 178 ntBASIC13□□□□□ -0.33
AP3S2P59780 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
AP3S2P59780 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13□□□□□ -0.33
AP3S2P59780 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S2P59780 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.99□□□□□ -0.33
AP3S2P59780 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
AP3S2P59780 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
AP3S2P59780 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms