Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.91□□□□□ -0.18
CDH11P55287 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 AC010336.2-201ENST00000564226 506 ntBASIC13.91□□□□□ -0.18
CDH11P55287 AC104794.3-201ENST00000566840 1248 ntBASIC13.91□□□□□ -0.18
CDH11P55287 AL132655.2-201ENST00000596276 594 ntBASIC13.91□□□□□ -0.18
CDH11P55287 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.91□□□□□ -0.18
CDH11P55287 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.91□□□□□ -0.18
CDH11P55287 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.91□□□□□ -0.18
CDH11P55287 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.91□□□□□ -0.18
CDH11P55287 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH11P55287 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CDH11P55287 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH11P55287 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
CDH11P55287 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH11P55287 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.91□□□□□ -0.18
CDH11P55287 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
CDH11P55287 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CDH11P55287 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH11P55287 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
CDH11P55287 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CDH11P55287 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 AC097359.2-201ENST00000604992 2389 ntBASIC13.9□□□□□ -0.18
CDH11P55287 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CDH11P55287 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CDH11P55287 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.9□□□□□ -0.18
CDH11P55287 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CDH11P55287 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 AC138969.2-201ENST00000532739 9932 ntBASIC13.9□□□□□ -0.18
CDH11P55287 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.9□□□□□ -0.18
CDH11P55287 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CDH11P55287 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CDH11P55287 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 FO393414.2-201ENST00000405153 598 ntBASIC13.9□□□□□ -0.18
CDH11P55287 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.9□□□□□ -0.18
CDH11P55287 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.9□□□□□ -0.18
CDH11P55287 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 ZNF890P-202ENST00000530367 1156 ntBASIC13.9□□□□□ -0.18
CDH11P55287 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.9□□□□□ -0.18
CDH11P55287 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.9□□□□□ -0.18
CDH11P55287 AL662799.1-202ENST00000614205 422 ntBASIC13.9□□□□□ -0.18
CDH11P55287 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.9□□□□□ -0.18
CDH11P55287 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.9□□□□□ -0.18
CDH11P55287 AC004840.1-201ENST00000636359 365 ntBASIC13.9□□□□□ -0.18
CDH11P55287 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 KRT8P12-202ENST00000472924 1397 ntBASIC13.9□□□□□ -0.18
CDH11P55287 BTBD7P1-201ENST00000447253 1453 ntBASIC13.9□□□□□ -0.18
CDH11P55287 AC087386.2-201ENST00000623212 4637 ntBASIC13.9□□□□□ -0.18
CDH11P55287 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.9□□□□□ -0.18
CDH11P55287 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 AC027601.5-201ENST00000624065 2482 ntBASIC13.9□□□□□ -0.18
CDH11P55287 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.9□□□□□ -0.18
CDH11P55287 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CDH11P55287 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CDH11P55287 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
CDH11P55287 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CDH11P55287 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.9□□□□□ -0.18
CDH11P55287 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.9□□□□□ -0.18
CDH11P55287 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDH11P55287 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CDH11P55287 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CDH11P55287 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
CDH11P55287 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CDH11P55287 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.19
CDH11P55287 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CDH11P55287 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CDH11P55287 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CDH11P55287 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CDH11P55287 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH11P55287 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms