Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH8P55286 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.07■□□□□ 0.16
CDH8P55286 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH8P55286 HLA-V-201ENST00000429037 534 ntBASIC16.07■□□□□ 0.16
CDH8P55286 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.07■□□□□ 0.16
CDH8P55286 AP003171.2-201ENST00000528208 925 ntBASIC16.07■□□□□ 0.16
CDH8P55286 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CDH8P55286 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.07■□□□□ 0.16
CDH8P55286 AP005482.1-201ENST00000563722 1273 ntBASIC16.07■□□□□ 0.16
CDH8P55286 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.07■□□□□ 0.16
CDH8P55286 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH8P55286 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH8P55286 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CDH8P55286 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH8P55286 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.07■□□□□ 0.16
CDH8P55286 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH8P55286 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH8P55286 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH8P55286 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.07■□□□□ 0.16
CDH8P55286 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CDH8P55286 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.07■□□□□ 0.16
CDH8P55286 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH8P55286 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
CDH8P55286 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CDH8P55286 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 CICP14-201ENST00000629111 2732 ntBASIC16.06■□□□□ 0.16
CDH8P55286 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH8P55286 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH8P55286 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH8P55286 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 AL354989.2-201ENST00000435838 1540 ntBASIC16.06■□□□□ 0.16
CDH8P55286 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH8P55286 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CDH8P55286 FKBP4P6-201ENST00000457486 1332 ntBASIC16.06■□□□□ 0.16
CDH8P55286 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CDH8P55286 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH8P55286 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 AC007274.1-201ENST00000439805 662 ntBASIC16.06■□□□□ 0.16
CDH8P55286 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 BNIP3P42-201ENST00000454982 569 ntBASIC16.06■□□□□ 0.16
CDH8P55286 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.06■□□□□ 0.16
CDH8P55286 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.06■□□□□ 0.16
CDH8P55286 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH8P55286 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.06■□□□□ 0.16
CDH8P55286 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH8P55286 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.06■□□□□ 0.16
CDH8P55286 BNIP3P29-201ENST00000598302 571 ntBASIC16.06■□□□□ 0.16
CDH8P55286 AC011447.5-201ENST00000616168 564 ntBASIC16.06■□□□□ 0.16
CDH8P55286 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.06■□□□□ 0.16
CDH8P55286 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CDH8P55286 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CDH8P55286 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH8P55286 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH8P55286 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 FLJ16779-201ENST00000612722 7638 ntBASIC16.06■□□□□ 0.16
CDH8P55286 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH8P55286 AC023824.1-201ENST00000562945 2975 ntBASIC16.05■□□□□ 0.16
CDH8P55286 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH8P55286 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CDH8P55286 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH8P55286 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CDH8P55286 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 AHCYP2-201ENST00000430630 1300 ntBASIC16.05■□□□□ 0.16
CDH8P55286 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CDH8P55286 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.05■□□□□ 0.16
CDH8P55286 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH8P55286 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.05■□□□□ 0.16
CDH8P55286 FAM8A4P-201ENST00000435433 1213 ntBASIC16.05■□□□□ 0.16
CDH8P55286 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDH8P55286 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.05■□□□□ 0.16
CDH8P55286 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.05■□□□□ 0.16
CDH8P55286 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.05■□□□□ 0.16
CDH8P55286 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms