Protein–RNA interactions for Protein: P55196

AFDN, Afadin, humanhuman

Known RBP Predictions only

Length 1,824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFDNP55196 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AFDNP55196 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.63■□□□□ 0.57
AFDNP55196 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AFDNP55196 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AFDNP55196 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC18.63■□□□□ 0.57
AFDNP55196 RPL18AP3-201ENST00000462885 528 ntBASIC18.63■□□□□ 0.57
AFDNP55196 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.63■□□□□ 0.57
AFDNP55196 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.63■□□□□ 0.57
AFDNP55196 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC18.63■□□□□ 0.57
AFDNP55196 DNM1P30-201ENST00000563586 452 ntBASIC18.63■□□□□ 0.57
AFDNP55196 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.63■□□□□ 0.57
AFDNP55196 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
AFDNP55196 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
AFDNP55196 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AFDNP55196 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AFDNP55196 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
AFDNP55196 KRT8P31-201ENST00000504812 1408 ntBASIC18.62■□□□□ 0.57
AFDNP55196 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.62■□□□□ 0.57
AFDNP55196 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AFDNP55196 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
AFDNP55196 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AFDNP55196 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.62■□□□□ 0.57
AFDNP55196 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
AFDNP55196 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
AFDNP55196 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AFDNP55196 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
AFDNP55196 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
AFDNP55196 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AFDNP55196 RNA5SP359-201ENST00000364838 113 ntBASIC18.62■□□□□ 0.57
AFDNP55196 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AFDNP55196 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC18.62■□□□□ 0.57
AFDNP55196 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AFDNP55196 AC006122.1-201ENST00000493323 440 ntBASIC18.62■□□□□ 0.57
AFDNP55196 SCARNA21-201ENST00000517026 139 ntBASIC18.62■□□□□ 0.57
AFDNP55196 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC18.62■□□□□ 0.57
AFDNP55196 MIR4522-201ENST00000584932 87 ntBASIC18.62■□□□□ 0.57
AFDNP55196 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC18.62■□□□□ 0.57
AFDNP55196 AC025262.2-201ENST00000623975 1056 ntBASIC18.62■□□□□ 0.57
AFDNP55196 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
AFDNP55196 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
AFDNP55196 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
AFDNP55196 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AFDNP55196 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
AFDNP55196 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.62■□□□□ 0.57
AFDNP55196 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.62■□□□□ 0.57
AFDNP55196 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AFDNP55196 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AFDNP55196 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
AFDNP55196 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
AFDNP55196 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.62■□□□□ 0.57
AFDNP55196 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AFDNP55196 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AFDNP55196 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.61■□□□□ 0.57
AFDNP55196 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AFDNP55196 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
AFDNP55196 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.61■□□□□ 0.57
AFDNP55196 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
AFDNP55196 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AFDNP55196 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC18.61■□□□□ 0.57
AFDNP55196 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.61■□□□□ 0.57
AFDNP55196 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC18.61■□□□□ 0.57
AFDNP55196 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC18.61■□□□□ 0.57
AFDNP55196 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC18.61■□□□□ 0.57
AFDNP55196 MIR4649-201ENST00000582839 64 ntBASIC18.61■□□□□ 0.57
AFDNP55196 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AFDNP55196 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AFDNP55196 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
AFDNP55196 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
AFDNP55196 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AFDNP55196 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AFDNP55196 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AFDNP55196 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AFDNP55196 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
AFDNP55196 FRMPD2B-201ENST00000431305 1347 ntBASIC18.61■□□□□ 0.57
AFDNP55196 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
AFDNP55196 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.61■□□□□ 0.57
AFDNP55196 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AFDNP55196 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
AFDNP55196 FAM90A2P-201ENST00000511144 1395 ntBASIC18.61■□□□□ 0.57
AFDNP55196 FAM90A25P-201ENST00000528404 1395 ntBASIC18.61■□□□□ 0.57
AFDNP55196 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AFDNP55196 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AFDNP55196 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.6■□□□□ 0.57
AFDNP55196 BX088702.1-201ENST00000610784 235 ntBASIC18.6■□□□□ 0.57
AFDNP55196 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AFDNP55196 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AFDNP55196 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AFDNP55196 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.6■□□□□ 0.57
AFDNP55196 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC18.6■□□□□ 0.57
AFDNP55196 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
AFDNP55196 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AFDNP55196 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
AFDNP55196 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AFDNP55196 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AFDNP55196 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AFDNP55196 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AFDNP55196 KRT8P28-201ENST00000433288 1390 ntBASIC18.6■□□□□ 0.57
AFDNP55196 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC18.6■□□□□ 0.57
AFDNP55196 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
AFDNP55196 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms