Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHB3P54753 MIR3619-201ENST00000579667 83 ntBASIC15.66■□□□□ 0.1
EPHB3P54753 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
EPHB3P54753 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EPHB3P54753 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EPHB3P54753 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHB3P54753 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHB3P54753 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
EPHB3P54753 AC006058.4-201ENST00000624016 1670 ntBASIC15.66■□□□□ 0.1
EPHB3P54753 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHB3P54753 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHB3P54753 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.66■□□□□ 0.1
EPHB3P54753 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHB3P54753 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
EPHB3P54753 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.65■□□□□ 0.1
EPHB3P54753 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.65■□□□□ 0.1
EPHB3P54753 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
EPHB3P54753 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.65■□□□□ 0.1
EPHB3P54753 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.65■□□□□ 0.1
EPHB3P54753 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
EPHB3P54753 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 REXO1L2P-201ENST00000425429 2069 ntBASIC15.65■□□□□ 0.1
EPHB3P54753 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
EPHB3P54753 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 AL133466.1-201ENST00000447582 150 ntBASIC15.65■□□□□ 0.1
EPHB3P54753 SPTLC1P5-201ENST00000450718 252 ntBASIC15.65■□□□□ 0.1
EPHB3P54753 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.65■□□□□ 0.1
EPHB3P54753 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.65■□□□□ 0.1
EPHB3P54753 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.65■□□□□ 0.1
EPHB3P54753 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.65■□□□□ 0.1
EPHB3P54753 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.65■□□□□ 0.1
EPHB3P54753 CU633904.3-201ENST00000624042 1029 ntBASIC15.65■□□□□ 0.1
EPHB3P54753 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.65■□□□□ 0.1
EPHB3P54753 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.65■□□□□ 0.1
EPHB3P54753 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.65■□□□□ 0.1
EPHB3P54753 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.65■□□□□ 0.1
EPHB3P54753 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.65■□□□□ 0.1
EPHB3P54753 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.65■□□□□ 0.1
EPHB3P54753 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
EPHB3P54753 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
EPHB3P54753 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHB3P54753 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.64■□□□□ 0.1
EPHB3P54753 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
EPHB3P54753 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
EPHB3P54753 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHB3P54753 MIR600HG-201ENST00000449175 5984 ntBASIC15.64■□□□□ 0.09
EPHB3P54753 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.64■□□□□ 0.09
EPHB3P54753 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
EPHB3P54753 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
EPHB3P54753 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
EPHB3P54753 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHB3P54753 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
EPHB3P54753 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHB3P54753 AC023090.2-201ENST00000625182 2110 ntBASIC15.64■□□□□ 0.09
EPHB3P54753 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHB3P54753 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EPHB3P54753 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHB3P54753 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EPHB3P54753 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHB3P54753 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHB3P54753 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHB3P54753 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHB3P54753 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHB3P54753 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.64■□□□□ 0.09
EPHB3P54753 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.64■□□□□ 0.09
EPHB3P54753 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHB3P54753 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.64■□□□□ 0.09
EPHB3P54753 UPF3AP2-201ENST00000457924 1132 ntBASIC15.64■□□□□ 0.09
EPHB3P54753 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.64■□□□□ 0.09
EPHB3P54753 RN7SL11P-201ENST00000471305 293 ntBASIC15.64■□□□□ 0.09
EPHB3P54753 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms