Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 FGFR3P1-201ENST00000449999 601 ntBASIC17.71■□□□□ 0.43
CACNB3P54284 CICP12-201ENST00000455801 843 ntBASIC17.71■□□□□ 0.43
CACNB3P54284 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.71■□□□□ 0.43
CACNB3P54284 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CACNB3P54284 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CACNB3P54284 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
CACNB3P54284 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.71■□□□□ 0.43
CACNB3P54284 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.71■□□□□ 0.43
CACNB3P54284 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CACNB3P54284 AC018635.2-201ENST00000608625 364 ntBASIC17.71■□□□□ 0.43
CACNB3P54284 AC007718.1-201ENST00000621078 280 ntBASIC17.71■□□□□ 0.43
CACNB3P54284 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.71■□□□□ 0.43
CACNB3P54284 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNB3P54284 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CACNB3P54284 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CACNB3P54284 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.71■□□□□ 0.43
CACNB3P54284 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.71■□□□□ 0.43
CACNB3P54284 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CACNB3P54284 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNB3P54284 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNB3P54284 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CACNB3P54284 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CACNB3P54284 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.71■□□□□ 0.42
CACNB3P54284 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.71■□□□□ 0.42
CACNB3P54284 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CACNB3P54284 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.71■□□□□ 0.42
CACNB3P54284 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.71■□□□□ 0.42
CACNB3P54284 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CACNB3P54284 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.7■□□□□ 0.42
CACNB3P54284 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CACNB3P54284 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.7■□□□□ 0.42
CACNB3P54284 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CACNB3P54284 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.7■□□□□ 0.42
CACNB3P54284 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.7■□□□□ 0.42
CACNB3P54284 AC006335.1-201ENST00000445200 547 ntBASIC17.7■□□□□ 0.42
CACNB3P54284 LDHBP1-201ENST00000455730 1119 ntBASIC17.7■□□□□ 0.42
CACNB3P54284 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.7■□□□□ 0.42
CACNB3P54284 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.7■□□□□ 0.42
CACNB3P54284 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
CACNB3P54284 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CACNB3P54284 AC242376.1-201ENST00000559033 726 ntBASIC17.7■□□□□ 0.42
CACNB3P54284 MIR3147-201ENST00000577811 66 ntBASIC17.7■□□□□ 0.42
CACNB3P54284 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.7■□□□□ 0.42
CACNB3P54284 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.7■□□□□ 0.42
CACNB3P54284 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.7■□□□□ 0.42
CACNB3P54284 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 SSR4P1-203ENST00000599569 2260 ntBASIC17.7■□□□□ 0.42
CACNB3P54284 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.7■□□□□ 0.42
CACNB3P54284 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.7■□□□□ 0.42
CACNB3P54284 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CACNB3P54284 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CACNB3P54284 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNB3P54284 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNB3P54284 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CACNB3P54284 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CACNB3P54284 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNB3P54284 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNB3P54284 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNB3P54284 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNB3P54284 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CACNB3P54284 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNB3P54284 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CACNB3P54284 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC17.69■□□□□ 0.42
CACNB3P54284 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CACNB3P54284 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.69■□□□□ 0.42
CACNB3P54284 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.69■□□□□ 0.42
CACNB3P54284 FAM58BP-201ENST00000439056 645 ntBASIC17.69■□□□□ 0.42
CACNB3P54284 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.69■□□□□ 0.42
CACNB3P54284 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.69■□□□□ 0.42
CACNB3P54284 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CACNB3P54284 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.69■□□□□ 0.42
CACNB3P54284 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CACNB3P54284 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.69■□□□□ 0.42
CACNB3P54284 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CACNB3P54284 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.69■□□□□ 0.42
CACNB3P54284 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.69■□□□□ 0.42
CACNB3P54284 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNB3P54284 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CACNB3P54284 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNB3P54284 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CACNB3P54284 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CACNB3P54284 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms