Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 BX284668.2-205ENST00000619677 828 ntBASIC18.31■□□□□ 0.52
NUP98P52948 AC073911.3-201ENST00000624401 631 ntBASIC18.31■□□□□ 0.52
NUP98P52948 MARK2P16-201ENST00000605714 1723 ntBASIC18.31■□□□□ 0.52
NUP98P52948 AC022532.1-201ENST00000624563 1728 ntBASIC18.31■□□□□ 0.52
NUP98P52948 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC18.31■□□□□ 0.52
NUP98P52948 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC18.31■□□□□ 0.52
NUP98P52948 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC18.31■□□□□ 0.52
NUP98P52948 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
NUP98P52948 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.31■□□□□ 0.52
NUP98P52948 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC18.31■□□□□ 0.52
NUP98P52948 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.31■□□□□ 0.52
NUP98P52948 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NUP98P52948 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 AP002353.1-201ENST00000528257 1599 ntBASIC18.31■□□□□ 0.52
NUP98P52948 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC18.31■□□□□ 0.52
NUP98P52948 AC006486.2-201ENST00000624246 2199 ntBASIC18.31■□□□□ 0.52
NUP98P52948 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
NUP98P52948 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.31■□□□□ 0.52
NUP98P52948 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NUP98P52948 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC18.3■□□□□ 0.52
NUP98P52948 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC18.3■□□□□ 0.52
NUP98P52948 AC130709.1-201ENST00000484779 1212 ntBASIC18.3■□□□□ 0.52
NUP98P52948 DNM1P30-201ENST00000563586 452 ntBASIC18.3■□□□□ 0.52
NUP98P52948 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NUP98P52948 AC005041.3-201ENST00000606287 649 ntBASIC18.3■□□□□ 0.52
NUP98P52948 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC18.3■□□□□ 0.52
NUP98P52948 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NUP98P52948 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 AC015688.4-201ENST00000580780 1647 ntBASIC18.3■□□□□ 0.52
NUP98P52948 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC18.3■□□□□ 0.52
NUP98P52948 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NUP98P52948 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NUP98P52948 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC18.3■□□□□ 0.52
NUP98P52948 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC18.3■□□□□ 0.52
NUP98P52948 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NUP98P52948 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC18.3■□□□□ 0.52
NUP98P52948 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC18.3■□□□□ 0.52
NUP98P52948 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC18.3■□□□□ 0.52
NUP98P52948 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC18.3■□□□□ 0.52
NUP98P52948 RN7SL277P-201ENST00000481521 288 ntBASIC18.3■□□□□ 0.52
NUP98P52948 NEU3-207ENST00000534628 746 ntTSL 2 BASIC18.3■□□□□ 0.52
NUP98P52948 SIGLEC18P-201ENST00000602271 909 ntBASIC18.3■□□□□ 0.52
NUP98P52948 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NUP98P52948 PAUPAR-201ENST00000630360 2965 ntBASIC18.3■□□□□ 0.52
NUP98P52948 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NUP98P52948 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NUP98P52948 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.3■□□□□ 0.52
NUP98P52948 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NUP98P52948 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC18.29■□□□□ 0.52
NUP98P52948 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NUP98P52948 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NUP98P52948 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NUP98P52948 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NUP98P52948 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NUP98P52948 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NUP98P52948 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NUP98P52948 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NUP98P52948 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC18.29■□□□□ 0.52
NUP98P52948 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
NUP98P52948 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NUP98P52948 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC18.29■□□□□ 0.52
NUP98P52948 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC18.29■□□□□ 0.52
NUP98P52948 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.29■□□□□ 0.52
NUP98P52948 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NUP98P52948 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NUP98P52948 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC18.29■□□□□ 0.52
NUP98P52948 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NUP98P52948 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NUP98P52948 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NUP98P52948 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NUP98P52948 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms