Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC015922.1-201ENST00000421102 1152 ntBASIC13.36□□□□□ -0.27
SOX2P48431 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SOX2P48431 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.36□□□□□ -0.27
SOX2P48431 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.36□□□□□ -0.27
SOX2P48431 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.36□□□□□ -0.27
SOX2P48431 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.36□□□□□ -0.27
SOX2P48431 AC025048.3-201ENST00000590609 569 ntBASIC13.36□□□□□ -0.27
SOX2P48431 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.36□□□□□ -0.27
SOX2P48431 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SOX2P48431 AC005702.4-201ENST00000618393 416 ntBASIC13.36□□□□□ -0.27
SOX2P48431 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX2P48431 AL513210.1-201ENST00000629608 234 ntBASIC13.36□□□□□ -0.27
SOX2P48431 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.36□□□□□ -0.27
SOX2P48431 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.36□□□□□ -0.27
SOX2P48431 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX2P48431 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX2P48431 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SOX2P48431 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SOX2P48431 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX2P48431 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX2P48431 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX2P48431 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX2P48431 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX2P48431 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SOX2P48431 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.36□□□□□ -0.27
SOX2P48431 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SOX2P48431 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX2P48431 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX2P48431 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SOX2P48431 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SOX2P48431 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SOX2P48431 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.36□□□□□ -0.27
SOX2P48431 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX2P48431 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX2P48431 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SOX2P48431 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.35□□□□□ -0.27
SOX2P48431 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
SOX2P48431 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SOX2P48431 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.35□□□□□ -0.27
SOX2P48431 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.35□□□□□ -0.27
SOX2P48431 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 AL121723.1-201ENST00000445194 1519 ntBASIC13.35□□□□□ -0.27
SOX2P48431 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.35□□□□□ -0.27
SOX2P48431 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SOX2P48431 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SOX2P48431 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.35□□□□□ -0.27
SOX2P48431 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.35□□□□□ -0.27
SOX2P48431 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.35□□□□□ -0.27
SOX2P48431 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.35□□□□□ -0.27
SOX2P48431 KRT18P58-201ENST00000527480 1120 ntBASIC13.35□□□□□ -0.27
SOX2P48431 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.35□□□□□ -0.27
SOX2P48431 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.35□□□□□ -0.27
SOX2P48431 AC005829.1-201ENST00000570002 483 ntBASIC13.35□□□□□ -0.27
SOX2P48431 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 LINC01115-203ENST00000606068 577 ntBASIC13.35□□□□□ -0.27
SOX2P48431 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SOX2P48431 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.35□□□□□ -0.27
SOX2P48431 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 AC152010.1-201ENST00000415779 2006 ntBASIC13.35□□□□□ -0.27
SOX2P48431 CETN4P-206ENST00000642099 2168 ntBASIC13.35□□□□□ -0.27
SOX2P48431 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
SOX2P48431 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.35□□□□□ -0.27
SOX2P48431 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SOX2P48431 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SOX2P48431 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.35□□□□□ -0.27
SOX2P48431 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.35□□□□□ -0.27
SOX2P48431 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
SOX2P48431 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.35□□□□□ -0.27
SOX2P48431 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SOX2P48431 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SOX2P48431 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX2P48431 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.34□□□□□ -0.27
SOX2P48431 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SOX2P48431 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms