Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.93□□□□□ -0.18
SLC1A3P43003 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC1A3P43003 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SLC1A3P43003 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC1A3P43003 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SLC1A3P43003 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC1A3P43003 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 AL442647.2-201ENST00000429864 857 ntBASIC13.93□□□□□ -0.18
SLC1A3P43003 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC1A3P43003 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC1A3P43003 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC1A3P43003 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SLC1A3P43003 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC1A3P43003 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.93□□□□□ -0.18
SLC1A3P43003 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC1A3P43003 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC1A3P43003 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC1A3P43003 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC1A3P43003 AL132655.2-201ENST00000596276 594 ntBASIC13.93□□□□□ -0.18
SLC1A3P43003 LINC02560-201ENST00000596379 459 ntBASIC13.93□□□□□ -0.18
SLC1A3P43003 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC1A3P43003 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 MIR8072-201ENST00000614241 80 ntBASIC13.93□□□□□ -0.18
SLC1A3P43003 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC1A3P43003 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC1A3P43003 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC1A3P43003 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC1A3P43003 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SLC1A3P43003 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC1A3P43003 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 AC006504.5-208ENST00000588784 2401 ntBASIC13.93□□□□□ -0.18
SLC1A3P43003 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SLC1A3P43003 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC1A3P43003 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SLC1A3P43003 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC1A3P43003 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC1A3P43003 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC1A3P43003 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SLC1A3P43003 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC1A3P43003 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC1A3P43003 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SLC1A3P43003 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SLC1A3P43003 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SLC1A3P43003 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SLC1A3P43003 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC1A3P43003 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
SLC1A3P43003 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SLC1A3P43003 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC1A3P43003 NUS1P3-201ENST00000423502 862 ntBASIC13.92□□□□□ -0.18
SLC1A3P43003 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.92□□□□□ -0.18
SLC1A3P43003 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC1A3P43003 AC123567.1-201ENST00000548294 1261 ntBASIC13.92□□□□□ -0.18
SLC1A3P43003 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC1A3P43003 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC1A3P43003 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC1A3P43003 AC120045.2-201ENST00000567334 178 ntBASIC13.92□□□□□ -0.18
SLC1A3P43003 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC1A3P43003 MIR4745-201ENST00000577608 62 ntBASIC13.92□□□□□ -0.18
SLC1A3P43003 RN7SL204P-201ENST00000582831 262 ntBASIC13.92□□□□□ -0.18
SLC1A3P43003 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC1A3P43003 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.92□□□□□ -0.18
SLC1A3P43003 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC1A3P43003 AC008761.3-201ENST00000624803 892 ntBASIC13.92□□□□□ -0.18
SLC1A3P43003 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC1A3P43003 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms