Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HTR1EP28566 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HTR1EP28566 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HTR1EP28566 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HTR1EP28566 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.52□□□□□ -0.09
HTR1EP28566 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HTR1EP28566 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HTR1EP28566 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HTR1EP28566 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.52□□□□□ -0.09
HTR1EP28566 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.52□□□□□ -0.09
HTR1EP28566 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HTR1EP28566 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HTR1EP28566 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HTR1EP28566 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HTR1EP28566 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HTR1EP28566 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
HTR1EP28566 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HTR1EP28566 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.51□□□□□ -0.09
HTR1EP28566 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.51□□□□□ -0.09
HTR1EP28566 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.51□□□□□ -0.09
HTR1EP28566 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.51□□□□□ -0.09
HTR1EP28566 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
HTR1EP28566 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.51□□□□□ -0.09
HTR1EP28566 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.51□□□□□ -0.09
HTR1EP28566 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.51□□□□□ -0.09
HTR1EP28566 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.51□□□□□ -0.09
HTR1EP28566 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HTR1EP28566 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
HTR1EP28566 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.51□□□□□ -0.09
HTR1EP28566 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
HTR1EP28566 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
HTR1EP28566 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.51□□□□□ -0.09
HTR1EP28566 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.51□□□□□ -0.09
HTR1EP28566 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.51□□□□□ -0.09
HTR1EP28566 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.51□□□□□ -0.09
HTR1EP28566 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.51□□□□□ -0.09
HTR1EP28566 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.51□□□□□ -0.09
HTR1EP28566 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.51□□□□□ -0.09
HTR1EP28566 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.51□□□□□ -0.09
HTR1EP28566 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
HTR1EP28566 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HTR1EP28566 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HTR1EP28566 BTBD7P1-201ENST00000447253 1453 ntBASIC14.5□□□□□ -0.09
HTR1EP28566 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HTR1EP28566 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HTR1EP28566 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
HTR1EP28566 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HTR1EP28566 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HTR1EP28566 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.5□□□□□ -0.09
HTR1EP28566 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HTR1EP28566 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.5□□□□□ -0.09
HTR1EP28566 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.5□□□□□ -0.09
HTR1EP28566 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.5□□□□□ -0.09
HTR1EP28566 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HTR1EP28566 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.5□□□□□ -0.09
HTR1EP28566 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HTR1EP28566 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HTR1EP28566 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HTR1EP28566 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
HTR1EP28566 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HTR1EP28566 AL133267.1-201ENST00000398220 340 ntBASIC14.5□□□□□ -0.09
HTR1EP28566 AC079776.1-201ENST00000401540 1152 ntBASIC14.5□□□□□ -0.09
HTR1EP28566 AC112492.5-201ENST00000421897 457 ntBASIC14.5□□□□□ -0.09
HTR1EP28566 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.5□□□□□ -0.09
HTR1EP28566 TPT1P11-201ENST00000458482 498 ntBASIC14.5□□□□□ -0.09
HTR1EP28566 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.5□□□□□ -0.09
HTR1EP28566 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.5□□□□□ -0.09
HTR1EP28566 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.5□□□□□ -0.09
HTR1EP28566 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.5□□□□□ -0.09
HTR1EP28566 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.5□□□□□ -0.09
HTR1EP28566 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.5□□□□□ -0.09
HTR1EP28566 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.5□□□□□ -0.09
HTR1EP28566 AC008494.3-201ENST00000606615 944 ntBASIC14.5□□□□□ -0.09
HTR1EP28566 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.5□□□□□ -0.09
HTR1EP28566 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
HTR1EP28566 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HTR1EP28566 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms