Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
CD40P25942 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.99□□□□□ -0.33
CD40P25942 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.99□□□□□ -0.33
CD40P25942 AC104982.3-201ENST00000581995 514 ntBASIC12.99□□□□□ -0.33
CD40P25942 AL118558.3-201ENST00000607414 1079 ntBASIC12.99□□□□□ -0.33
CD40P25942 AL022328.3-201ENST00000607943 679 ntBASIC12.99□□□□□ -0.33
CD40P25942 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.99□□□□□ -0.33
CD40P25942 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.99□□□□□ -0.33
CD40P25942 AC005695.3-201ENST00000614522 232 ntBASIC12.99□□□□□ -0.33
CD40P25942 GPR182-203ENST00000622922 591 ntBASIC12.99□□□□□ -0.33
CD40P25942 REXO1L2P-201ENST00000425429 2069 ntBASIC12.99□□□□□ -0.33
CD40P25942 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
CD40P25942 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 AC046158.3-201ENST00000624947 2558 ntBASIC12.99□□□□□ -0.33
CD40P25942 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CD40P25942 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CD40P25942 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CD40P25942 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
CD40P25942 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.98□□□□□ -0.33
CD40P25942 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.98□□□□□ -0.33
CD40P25942 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.98□□□□□ -0.33
CD40P25942 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.98□□□□□ -0.33
CD40P25942 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC12.98□□□□□ -0.33
CD40P25942 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CD40P25942 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.98□□□□□ -0.33
CD40P25942 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.98□□□□□ -0.33
CD40P25942 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.98□□□□□ -0.33
CD40P25942 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.98□□□□□ -0.33
CD40P25942 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CD40P25942 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CD40P25942 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CD40P25942 PPT1-215ENST00000641471 2368 ntBASIC12.98□□□□□ -0.33
CD40P25942 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CD40P25942 AC004945.1-201ENST00000416738 983 ntBASIC12.98□□□□□ -0.33
CD40P25942 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.98□□□□□ -0.33
CD40P25942 AC006033.1-201ENST00000440505 426 ntBASIC12.98□□□□□ -0.33
CD40P25942 CHMP1AP1-201ENST00000445563 662 ntBASIC12.98□□□□□ -0.33
CD40P25942 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.98□□□□□ -0.33
CD40P25942 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.98□□□□□ -0.33
CD40P25942 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.98□□□□□ -0.33
CD40P25942 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.98□□□□□ -0.33
CD40P25942 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.98□□□□□ -0.33
CD40P25942 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.98□□□□□ -0.33
CD40P25942 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
CD40P25942 AL096828.3-201ENST00000615354 462 ntBASIC12.98□□□□□ -0.33
CD40P25942 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.98□□□□□ -0.33
CD40P25942 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CD40P25942 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CD40P25942 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.98□□□□□ -0.33
CD40P25942 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.98□□□□□ -0.33
CD40P25942 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.98□□□□□ -0.33
CD40P25942 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CD40P25942 AC138035.3-201ENST00000622706 2791 ntBASIC12.98□□□□□ -0.33
CD40P25942 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40P25942 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD40P25942 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD40P25942 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD40P25942 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD40P25942 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CD40P25942 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CD40P25942 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD40P25942 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CD40P25942 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.97□□□□□ -0.33
CD40P25942 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CD40P25942 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CD40P25942 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
CD40P25942 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
CD40P25942 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms