Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.2□□□□□ -0.3
CCL2P13500 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CCL2P13500 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL2P13500 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL2P13500 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL2P13500 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL2P13500 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.2□□□□□ -0.3
CCL2P13500 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 INTS4P1-203ENST00000641008 3683 ntBASIC13.19□□□□□ -0.3
CCL2P13500 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
CCL2P13500 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CCL2P13500 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.19□□□□□ -0.3
CCL2P13500 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
CCL2P13500 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL2P13500 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
CCL2P13500 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL2P13500 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL2P13500 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL2P13500 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL2P13500 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL2P13500 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CCL2P13500 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CCL2P13500 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL2P13500 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL2P13500 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 AC012441.1-201ENST00000446669 685 ntBASIC13.19□□□□□ -0.3
CCL2P13500 GAPDHP21-201ENST00000450301 1010 ntBASIC13.19□□□□□ -0.3
CCL2P13500 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL2P13500 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CCL2P13500 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL2P13500 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL2P13500 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CCL2P13500 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL2P13500 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL2P13500 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CCL2P13500 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.19□□□□□ -0.3
CCL2P13500 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL2P13500 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL2P13500 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CCL2P13500 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL2P13500 AC055811.4-201ENST00000624039 1754 ntBASIC13.19□□□□□ -0.3
CCL2P13500 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CCL2P13500 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL2P13500 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL2P13500 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CCL2P13500 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CCL2P13500 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL2P13500 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL2P13500 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL2P13500 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL2P13500 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL2P13500 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL2P13500 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL2P13500 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL2P13500 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL2P13500 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL2P13500 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL2P13500 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.18□□□□□ -0.3
CCL2P13500 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.18□□□□□ -0.3
CCL2P13500 AL355864.2-201ENST00000447420 863 ntBASIC13.18□□□□□ -0.3
CCL2P13500 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.18□□□□□ -0.3
CCL2P13500 USP32P1-208ENST00000506594 1164 ntBASIC13.18□□□□□ -0.3
CCL2P13500 AP001889.1-201ENST00000525414 633 ntBASIC13.18□□□□□ -0.3
CCL2P13500 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.18□□□□□ -0.3
CCL2P13500 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL2P13500 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL2P13500 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CCL2P13500 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL2P13500 AC145423.3-201ENST00000615987 467 ntBASIC13.18□□□□□ -0.3
CCL2P13500 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL2P13500 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms