Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
COL11A1P12107 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
COL11A1P12107 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.73■□□□□ 0.27
COL11A1P12107 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
COL11A1P12107 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL11A1P12107 AL627389.1-201ENST00000413508 1182 ntBASIC16.73■□□□□ 0.27
COL11A1P12107 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.73■□□□□ 0.27
COL11A1P12107 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL11A1P12107 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL11A1P12107 AL627422.1-201ENST00000434104 580 ntBASIC16.73■□□□□ 0.27
COL11A1P12107 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.73■□□□□ 0.27
COL11A1P12107 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.73■□□□□ 0.27
COL11A1P12107 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
COL11A1P12107 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.73■□□□□ 0.27
COL11A1P12107 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.73■□□□□ 0.27
COL11A1P12107 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL11A1P12107 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.73■□□□□ 0.27
COL11A1P12107 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL11A1P12107 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
COL11A1P12107 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL11A1P12107 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL11A1P12107 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.73■□□□□ 0.27
COL11A1P12107 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
COL11A1P12107 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
COL11A1P12107 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL11A1P12107 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
COL11A1P12107 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL11A1P12107 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL11A1P12107 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
COL11A1P12107 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL11A1P12107 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL11A1P12107 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL11A1P12107 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.73■□□□□ 0.27
COL11A1P12107 LINC00554-201ENST00000564841 3011 ntBASIC16.73■□□□□ 0.27
COL11A1P12107 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL11A1P12107 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL11A1P12107 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL11A1P12107 IGHV3-37-201ENST00000518544 340 ntBASIC16.73■□□□□ 0.27
COL11A1P12107 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.73■□□□□ 0.27
COL11A1P12107 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL11A1P12107 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.72■□□□□ 0.27
COL11A1P12107 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
COL11A1P12107 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL11A1P12107 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
COL11A1P12107 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.72■□□□□ 0.27
COL11A1P12107 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL11A1P12107 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
COL11A1P12107 AC009093.10-201ENST00000641956 1442 ntBASIC16.72■□□□□ 0.27
COL11A1P12107 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL11A1P12107 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
COL11A1P12107 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL11A1P12107 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL11A1P12107 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
COL11A1P12107 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.72■□□□□ 0.27
COL11A1P12107 AC074138.1-201ENST00000611182 1303 ntBASIC16.72■□□□□ 0.27
COL11A1P12107 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL11A1P12107 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.72■□□□□ 0.27
COL11A1P12107 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
COL11A1P12107 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.72■□□□□ 0.27
COL11A1P12107 ORAOV1P1-201ENST00000503108 395 ntBASIC16.72■□□□□ 0.27
COL11A1P12107 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.72■□□□□ 0.27
COL11A1P12107 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.72■□□□□ 0.27
COL11A1P12107 AC003686.1-201ENST00000550956 1034 ntBASIC16.72■□□□□ 0.27
COL11A1P12107 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.72■□□□□ 0.27
COL11A1P12107 AC124068.2-201ENST00000569473 1109 ntBASIC16.72■□□□□ 0.27
COL11A1P12107 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.72■□□□□ 0.27
COL11A1P12107 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.72■□□□□ 0.27
COL11A1P12107 AC073352.2-201ENST00000609385 439 ntBASIC16.72■□□□□ 0.27
COL11A1P12107 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
COL11A1P12107 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.72■□□□□ 0.27
COL11A1P12107 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL11A1P12107 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL11A1P12107 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL11A1P12107 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL11A1P12107 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL11A1P12107 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL11A1P12107 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
COL11A1P12107 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL11A1P12107 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.71■□□□□ 0.27
COL11A1P12107 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.71■□□□□ 0.27
COL11A1P12107 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
COL11A1P12107 AC015688.4-201ENST00000580780 1647 ntBASIC16.71■□□□□ 0.27
COL11A1P12107 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.71■□□□□ 0.27
COL11A1P12107 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL11A1P12107 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.71■□□□□ 0.27
COL11A1P12107 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL11A1P12107 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
COL11A1P12107 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL11A1P12107 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.71■□□□□ 0.27
COL11A1P12107 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL11A1P12107 AL807761.2-201ENST00000422849 729 ntBASIC16.71■□□□□ 0.27
COL11A1P12107 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.71■□□□□ 0.27
COL11A1P12107 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL11A1P12107 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.71■□□□□ 0.27
COL11A1P12107 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL11A1P12107 AC135983.4-201ENST00000564116 1262 ntBASIC16.71■□□□□ 0.27
COL11A1P12107 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.71■□□□□ 0.27
COL11A1P12107 AC084781.1-201ENST00000613737 656 ntBASIC16.71■□□□□ 0.27
COL11A1P12107 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
COL11A1P12107 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms