Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A1P11836 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC19.41■□□□□ 0.7
MS4A1P11836 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A1P11836 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A1P11836 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A1P11836 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A1P11836 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
MS4A1P11836 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A1P11836 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A1P11836 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
MS4A1P11836 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
MS4A1P11836 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC19.4■□□□□ 0.7
MS4A1P11836 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC19.4■□□□□ 0.7
MS4A1P11836 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
MS4A1P11836 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC19.4■□□□□ 0.7
MS4A1P11836 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.4■□□□□ 0.7
MS4A1P11836 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.4■□□□□ 0.7
MS4A1P11836 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
MS4A1P11836 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.4■□□□□ 0.7
MS4A1P11836 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.4■□□□□ 0.7
MS4A1P11836 AL603764.1-201ENST00000636452 321 ntBASIC19.4■□□□□ 0.7
MS4A1P11836 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC19.4■□□□□ 0.7
MS4A1P11836 AP001267.2-201ENST00000532619 2086 ntBASIC19.4■□□□□ 0.7
MS4A1P11836 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC19.4■□□□□ 0.7
MS4A1P11836 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
MS4A1P11836 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC19.4■□□□□ 0.7
MS4A1P11836 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A1P11836 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
MS4A1P11836 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MS4A1P11836 MBLAC2-202ENST00000514906 1936 ntBASIC19.39■□□□□ 0.7
MS4A1P11836 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC19.39■□□□□ 0.7
MS4A1P11836 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A1P11836 AC010327.5-201ENST00000586923 3061 ntBASIC19.39■□□□□ 0.69
MS4A1P11836 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A1P11836 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A1P11836 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A1P11836 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC19.39■□□□□ 0.69
MS4A1P11836 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A1P11836 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
MS4A1P11836 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC19.39■□□□□ 0.69
MS4A1P11836 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A1P11836 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A1P11836 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
MS4A1P11836 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.39■□□□□ 0.69
MS4A1P11836 C1QBPP1-201ENST00000400117 770 ntBASIC19.39■□□□□ 0.69
MS4A1P11836 FAM207CP-201ENST00000443486 507 ntBASIC19.39■□□□□ 0.69
MS4A1P11836 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.39■□□□□ 0.69
MS4A1P11836 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC19.39■□□□□ 0.69
MS4A1P11836 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC19.39■□□□□ 0.69
MS4A1P11836 AC092552.1-201ENST00000547243 906 ntBASIC19.39■□□□□ 0.69
MS4A1P11836 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.39■□□□□ 0.69
MS4A1P11836 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.39■□□□□ 0.69
MS4A1P11836 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.39■□□□□ 0.69
MS4A1P11836 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.39■□□□□ 0.69
MS4A1P11836 TMEM261P1-201ENST00000604899 340 ntBASIC19.39■□□□□ 0.69
MS4A1P11836 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A1P11836 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A1P11836 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A1P11836 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A1P11836 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC19.39■□□□□ 0.69
MS4A1P11836 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.39■□□□□ 0.69
MS4A1P11836 AL157414.3-201ENST00000624276 1954 ntBASIC19.39■□□□□ 0.69
MS4A1P11836 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC19.38■□□□□ 0.69
MS4A1P11836 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
MS4A1P11836 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
MS4A1P11836 AC097376.2-205ENST00000610159 5334 ntBASIC19.38■□□□□ 0.69
MS4A1P11836 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MS4A1P11836 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MS4A1P11836 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MS4A1P11836 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MS4A1P11836 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.38■□□□□ 0.69
MS4A1P11836 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MS4A1P11836 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MS4A1P11836 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
MS4A1P11836 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MS4A1P11836 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MS4A1P11836 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MS4A1P11836 AL139094.1-201ENST00000405549 1188 ntBASIC19.38■□□□□ 0.69
MS4A1P11836 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.38■□□□□ 0.69
MS4A1P11836 AC114812.1-204ENST00000449669 728 ntBASIC19.38■□□□□ 0.69
MS4A1P11836 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms