Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.74■□□□□ 0.43
TOP1P11387 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.74■□□□□ 0.43
TOP1P11387 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.74■□□□□ 0.43
TOP1P11387 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TOP1P11387 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.74■□□□□ 0.43
TOP1P11387 POM121L8P-201ENST00000417732 1281 ntBASIC17.74■□□□□ 0.43
TOP1P11387 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.74■□□□□ 0.43
TOP1P11387 POM121L9P-203ENST00000441984 1285 ntBASIC17.74■□□□□ 0.43
TOP1P11387 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.74■□□□□ 0.43
TOP1P11387 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.74■□□□□ 0.43
TOP1P11387 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.74■□□□□ 0.43
TOP1P11387 RNA5SP412-201ENST00000516234 123 ntBASIC17.74■□□□□ 0.43
TOP1P11387 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TOP1P11387 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.74■□□□□ 0.43
TOP1P11387 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.74■□□□□ 0.43
TOP1P11387 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.74■□□□□ 0.43
TOP1P11387 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.74■□□□□ 0.43
TOP1P11387 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 WASH3P-207ENST00000560956 1394 ntBASIC17.74■□□□□ 0.43
TOP1P11387 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TOP1P11387 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TOP1P11387 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TOP1P11387 AL009178.2-201ENST00000597278 2719 ntBASIC17.74■□□□□ 0.43
TOP1P11387 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.74■□□□□ 0.43
TOP1P11387 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TOP1P11387 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TOP1P11387 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TOP1P11387 AHCYP2-201ENST00000430630 1300 ntBASIC17.73■□□□□ 0.43
TOP1P11387 AL137783.1-201ENST00000623494 1896 ntBASIC17.73■□□□□ 0.43
TOP1P11387 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.73■□□□□ 0.43
TOP1P11387 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TOP1P11387 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TOP1P11387 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.73■□□□□ 0.43
TOP1P11387 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TOP1P11387 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TOP1P11387 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
TOP1P11387 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TOP1P11387 PCDHA3-202ENST00000532566 4594 ntBASIC17.73■□□□□ 0.43
TOP1P11387 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.73■□□□□ 0.43
TOP1P11387 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TOP1P11387 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TOP1P11387 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.73■□□□□ 0.43
TOP1P11387 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.73■□□□□ 0.43
TOP1P11387 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TOP1P11387 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TOP1P11387 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TOP1P11387 FAM21FP-201ENST00000426241 1131 ntBASIC17.73■□□□□ 0.43
TOP1P11387 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TOP1P11387 AC026434.2-201ENST00000506094 1078 ntBASIC17.73■□□□□ 0.43
TOP1P11387 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.73■□□□□ 0.43
TOP1P11387 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TOP1P11387 AL583810.1-201ENST00000553344 1045 ntBASIC17.73■□□□□ 0.43
TOP1P11387 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.73■□□□□ 0.43
TOP1P11387 AC023310.1-201ENST00000554836 735 ntBASIC17.73■□□□□ 0.43
TOP1P11387 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TOP1P11387 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TOP1P11387 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TOP1P11387 TCAF2P1-201ENST00000291129 2421 ntBASIC17.73■□□□□ 0.43
TOP1P11387 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.73■□□□□ 0.43
TOP1P11387 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TOP1P11387 CICP24-201ENST00000605464 2705 ntBASIC17.73■□□□□ 0.43
TOP1P11387 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.73■□□□□ 0.43
TOP1P11387 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TOP1P11387 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TOP1P11387 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TOP1P11387 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TOP1P11387 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP1P11387 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP1P11387 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TOP1P11387 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TOP1P11387 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.72■□□□□ 0.43
TOP1P11387 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TOP1P11387 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.72■□□□□ 0.43
TOP1P11387 MIR600HG-201ENST00000449175 5984 ntBASIC17.72■□□□□ 0.43
TOP1P11387 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.72■□□□□ 0.43
TOP1P11387 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP1P11387 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP1P11387 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP1P11387 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.72■□□□□ 0.43
TOP1P11387 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP1P11387 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TOP1P11387 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP1P11387 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms