Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
UBCP0CG48 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
UBCP0CG48 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.3□□□□□ -0.28
UBCP0CG48 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.3□□□□□ -0.28
UBCP0CG48 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.3□□□□□ -0.28
UBCP0CG48 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.3□□□□□ -0.28
UBCP0CG48 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.3□□□□□ -0.28
UBCP0CG48 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.3□□□□□ -0.28
UBCP0CG48 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.3□□□□□ -0.28
UBCP0CG48 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.3□□□□□ -0.28
UBCP0CG48 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 AC136759.1-202ENST00000530858 2194 ntBASIC13.3□□□□□ -0.28
UBCP0CG48 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.3□□□□□ -0.28
UBCP0CG48 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.3□□□□□ -0.28
UBCP0CG48 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.3□□□□□ -0.28
UBCP0CG48 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
UBCP0CG48 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
UBCP0CG48 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.3□□□□□ -0.28
UBCP0CG48 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.3□□□□□ -0.28
UBCP0CG48 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
UBCP0CG48 HLA-J-203ENST00000494367 1087 ntBASIC13.3□□□□□ -0.28
UBCP0CG48 AC069120.2-201ENST00000524091 540 ntBASIC13.3□□□□□ -0.28
UBCP0CG48 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.3□□□□□ -0.28
UBCP0CG48 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.3□□□□□ -0.28
UBCP0CG48 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.3□□□□□ -0.28
UBCP0CG48 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.3□□□□□ -0.28
UBCP0CG48 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.3□□□□□ -0.28
UBCP0CG48 AC027612.4-201ENST00000605371 583 ntBASIC13.3□□□□□ -0.28
UBCP0CG48 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.3□□□□□ -0.28
UBCP0CG48 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
UBCP0CG48 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 MBLAC2-202ENST00000514906 1936 ntBASIC13.3□□□□□ -0.28
UBCP0CG48 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.3□□□□□ -0.28
UBCP0CG48 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
UBCP0CG48 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.3□□□□□ -0.28
UBCP0CG48 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
UBCP0CG48 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.3□□□□□ -0.28
UBCP0CG48 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBCP0CG48 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.29□□□□□ -0.28
UBCP0CG48 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
UBCP0CG48 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
UBCP0CG48 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.29□□□□□ -0.28
UBCP0CG48 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
UBCP0CG48 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.29□□□□□ -0.28
UBCP0CG48 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.29□□□□□ -0.28
UBCP0CG48 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.29□□□□□ -0.28
UBCP0CG48 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
UBCP0CG48 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.29□□□□□ -0.28
UBCP0CG48 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.29□□□□□ -0.28
UBCP0CG48 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.29□□□□□ -0.28
UBCP0CG48 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.29□□□□□ -0.28
UBCP0CG48 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 TUBB3P1-201ENST00000405796 1332 ntBASIC13.29□□□□□ -0.28
UBCP0CG48 AC087499.5-201ENST00000452760 1342 ntBASIC13.29□□□□□ -0.28
UBCP0CG48 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
UBCP0CG48 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.29□□□□□ -0.28
UBCP0CG48 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
UBCP0CG48 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.29□□□□□ -0.28
UBCP0CG48 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
UBCP0CG48 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms