Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 FAM45BP-202ENST00000592932 1624 ntBASIC15.13■□□□□ 0.01
MMP2P08253 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
MMP2P08253 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.13■□□□□ 0.01
MMP2P08253 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MMP2P08253 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.13■□□□□ 0.01
MMP2P08253 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.13■□□□□ 0.01
MMP2P08253 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.13■□□□□ 0.01
MMP2P08253 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.13■□□□□ 0.01
MMP2P08253 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.12■□□□□ 0.01
MMP2P08253 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MMP2P08253 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
MMP2P08253 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.12■□□□□ 0.01
MMP2P08253 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.12■□□□□ 0.01
MMP2P08253 AC005912.2-201ENST00000619492 2400 ntBASIC15.12■□□□□ 0.01
MMP2P08253 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 AP000593.2-201ENST00000542775 1433 ntBASIC15.12■□□□□ 0.01
MMP2P08253 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
MMP2P08253 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.12■□□□□ 0.01
MMP2P08253 ANKRD19P-201ENST00000338192 862 ntBASIC15.12■□□□□ 0.01
MMP2P08253 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 CD8B2-202ENST00000417670 633 ntBASIC15.12■□□□□ 0.01
MMP2P08253 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
MMP2P08253 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MMP2P08253 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.12■□□□□ 0.01
MMP2P08253 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.12■□□□□ 0.01
MMP2P08253 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.12■□□□□ 0.01
MMP2P08253 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MMP2P08253 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.12■□□□□ 0.01
MMP2P08253 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.12■□□□□ 0.01
MMP2P08253 SNX29P1-201ENST00000548357 1007 ntBASIC15.12■□□□□ 0.01
MMP2P08253 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 AC006453.4-201ENST00000636949 1252 ntBASIC15.12■□□□□ 0.01
MMP2P08253 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
MMP2P08253 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.12■□□□□ 0.01
MMP2P08253 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
MMP2P08253 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.12■□□□□ 0.01
MMP2P08253 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.12■□□□□ 0.01
MMP2P08253 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
MMP2P08253 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.11■□□□□ 0.01
MMP2P08253 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP2P08253 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
MMP2P08253 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
MMP2P08253 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MMP2P08253 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.11■□□□□ 0.01
MMP2P08253 RN7SKP175-201ENST00000408472 289 ntBASIC15.11■□□□□ 0.01
MMP2P08253 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.11■□□□□ 0.01
MMP2P08253 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
MMP2P08253 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.11■□□□□ 0.01
MMP2P08253 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.11■□□□□ 0.01
MMP2P08253 RPL7P3-201ENST00000441388 714 ntBASIC15.11■□□□□ 0.01
MMP2P08253 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.11■□□□□ 0.01
MMP2P08253 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
MMP2P08253 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.11■□□□□ 0.01
MMP2P08253 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.11■□□□□ 0.01
MMP2P08253 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.11■□□□□ 0.01
MMP2P08253 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.11■□□□□ 0.01
MMP2P08253 AC138951.2-201ENST00000623455 1161 ntBASIC15.11■□□□□ 0.01
MMP2P08253 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MMP2P08253 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP2P08253 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
MMP2P08253 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MMP2P08253 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.11■□□□□ 0.01
MMP2P08253 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP2P08253 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.11■□□□□ 0.01
MMP2P08253 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
MMP2P08253 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP2P08253 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
MMP2P08253 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP2P08253 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP2P08253 AC097359.2-201ENST00000604992 2389 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms