Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 AC005740.2-201ENST00000511085 419 ntBASIC16.43■□□□□ 0.22
VTNP04004 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.43■□□□□ 0.22
VTNP04004 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.43■□□□□ 0.22
VTNP04004 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.43■□□□□ 0.22
VTNP04004 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.43■□□□□ 0.22
VTNP04004 AC100827.2-201ENST00000563214 1194 ntBASIC16.43■□□□□ 0.22
VTNP04004 NDUFV2P1-201ENST00000596415 907 ntBASIC16.43■□□□□ 0.22
VTNP04004 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 AL023803.2-201ENST00000620080 638 ntBASIC16.43■□□□□ 0.22
VTNP04004 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.43■□□□□ 0.22
VTNP04004 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.43■□□□□ 0.22
VTNP04004 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
VTNP04004 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 AL109954.1-202ENST00000564051 2148 ntBASIC16.43■□□□□ 0.22
VTNP04004 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.43■□□□□ 0.22
VTNP04004 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
VTNP04004 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
VTNP04004 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
VTNP04004 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
VTNP04004 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.42■□□□□ 0.22
VTNP04004 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 AC004899.1-201ENST00000424687 1714 ntBASIC16.42■□□□□ 0.22
VTNP04004 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 AC013268.4-201ENST00000637413 2228 ntBASIC16.42■□□□□ 0.22
VTNP04004 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.42■□□□□ 0.22
VTNP04004 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
VTNP04004 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.42■□□□□ 0.22
VTNP04004 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.42■□□□□ 0.22
VTNP04004 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
VTNP04004 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.42■□□□□ 0.22
VTNP04004 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.42■□□□□ 0.22
VTNP04004 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.42■□□□□ 0.22
VTNP04004 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
VTNP04004 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 DUX4L46-201ENST00000566845 751 ntBASIC16.42■□□□□ 0.22
VTNP04004 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.42■□□□□ 0.22
VTNP04004 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.42■□□□□ 0.22
VTNP04004 BNIP3P13-201ENST00000599968 566 ntBASIC16.42■□□□□ 0.22
VTNP04004 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.42■□□□□ 0.22
VTNP04004 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
VTNP04004 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.42■□□□□ 0.22
VTNP04004 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
VTNP04004 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.42■□□□□ 0.22
VTNP04004 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
VTNP04004 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
VTNP04004 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VTNP04004 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VTNP04004 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.41■□□□□ 0.22
VTNP04004 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTNP04004 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VTNP04004 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTNP04004 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTNP04004 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTNP04004 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.41■□□□□ 0.22
VTNP04004 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
VTNP04004 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTNP04004 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
VTNP04004 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
VTNP04004 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.41■□□□□ 0.22
VTNP04004 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VTNP04004 DPM3-202ENST00000368399 517 ntBASIC16.41■□□□□ 0.22
VTNP04004 CYP46A4P-201ENST00000414953 267 ntBASIC16.41■□□□□ 0.22
VTNP04004 AC104073.2-201ENST00000453737 312 ntBASIC16.41■□□□□ 0.22
VTNP04004 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.41■□□□□ 0.22
VTNP04004 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.41■□□□□ 0.22
VTNP04004 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VTNP04004 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.41■□□□□ 0.22
VTNP04004 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms