Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.9■□□□□ 0.3
ALDH1A1P00352 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.9■□□□□ 0.3
ALDH1A1P00352 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALDH1A1P00352 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ALDH1A1P00352 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.9■□□□□ 0.3
ALDH1A1P00352 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ALDH1A1P00352 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ALDH1A1P00352 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ALDH1A1P00352 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
ALDH1A1P00352 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
ALDH1A1P00352 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 AC112504.1-201ENST00000623415 1841 ntBASIC16.89■□□□□ 0.29
ALDH1A1P00352 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.89■□□□□ 0.29
ALDH1A1P00352 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ALDH1A1P00352 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ALDH1A1P00352 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC16.89■□□□□ 0.29
ALDH1A1P00352 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.89■□□□□ 0.29
ALDH1A1P00352 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.89■□□□□ 0.29
ALDH1A1P00352 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC16.89■□□□□ 0.29
ALDH1A1P00352 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.89■□□□□ 0.29
ALDH1A1P00352 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.89■□□□□ 0.29
ALDH1A1P00352 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.89■□□□□ 0.29
ALDH1A1P00352 AC131206.1-201ENST00000538078 1211 ntBASIC16.89■□□□□ 0.29
ALDH1A1P00352 AC003686.1-201ENST00000550956 1034 ntBASIC16.89■□□□□ 0.29
ALDH1A1P00352 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.89■□□□□ 0.29
ALDH1A1P00352 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC16.89■□□□□ 0.29
ALDH1A1P00352 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
ALDH1A1P00352 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
ALDH1A1P00352 MIR6746-201ENST00000620971 63 ntBASIC16.89■□□□□ 0.29
ALDH1A1P00352 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ALDH1A1P00352 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.89■□□□□ 0.29
ALDH1A1P00352 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.89■□□□□ 0.29
ALDH1A1P00352 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC16.89■□□□□ 0.29
ALDH1A1P00352 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALDH1A1P00352 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.89■□□□□ 0.29
ALDH1A1P00352 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ALDH1A1P00352 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.88■□□□□ 0.29
ALDH1A1P00352 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ALDH1A1P00352 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.88■□□□□ 0.29
ALDH1A1P00352 RN7SKP109-201ENST00000410592 316 ntBASIC16.88■□□□□ 0.29
ALDH1A1P00352 ACTBP7-201ENST00000418351 1124 ntBASIC16.88■□□□□ 0.29
ALDH1A1P00352 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.88■□□□□ 0.29
ALDH1A1P00352 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.88■□□□□ 0.29
ALDH1A1P00352 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 RN7SL23P-201ENST00000484055 275 ntBASIC16.88■□□□□ 0.29
ALDH1A1P00352 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.88■□□□□ 0.29
ALDH1A1P00352 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.88■□□□□ 0.29
ALDH1A1P00352 KRT8P1-201ENST00000557533 1207 ntBASIC16.88■□□□□ 0.29
ALDH1A1P00352 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
ALDH1A1P00352 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.88■□□□□ 0.29
ALDH1A1P00352 AC002044.2-201ENST00000624910 970 ntBASIC16.88■□□□□ 0.29
ALDH1A1P00352 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.88■□□□□ 0.29
ALDH1A1P00352 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ALDH1A1P00352 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ALDH1A1P00352 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 CTBP2P8-201ENST00000422584 1330 ntBASIC16.88■□□□□ 0.29
ALDH1A1P00352 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.88■□□□□ 0.29
ALDH1A1P00352 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms