Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.72□□□□□ -0.37
ABCA1O95477 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ABCA1O95477 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ABCA1O95477 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC12.72□□□□□ -0.37
ABCA1O95477 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ABCA1O95477 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC12.72□□□□□ -0.37
ABCA1O95477 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.72□□□□□ -0.37
ABCA1O95477 AC245884.6-201ENST00000515672 1067 ntBASIC12.72□□□□□ -0.37
ABCA1O95477 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.72□□□□□ -0.37
ABCA1O95477 AC023310.1-201ENST00000554836 735 ntBASIC12.72□□□□□ -0.37
ABCA1O95477 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
ABCA1O95477 AP005019.2-201ENST00000615104 511 ntBASIC12.72□□□□□ -0.37
ABCA1O95477 AC091812.3-201ENST00000621362 345 ntBASIC12.72□□□□□ -0.37
ABCA1O95477 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ABCA1O95477 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.72□□□□□ -0.37
ABCA1O95477 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ABCA1O95477 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ABCA1O95477 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
ABCA1O95477 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
ABCA1O95477 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.72□□□□□ -0.37
ABCA1O95477 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.72□□□□□ -0.37
ABCA1O95477 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ABCA1O95477 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ABCA1O95477 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.72□□□□□ -0.37
ABCA1O95477 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ABCA1O95477 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ABCA1O95477 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ABCA1O95477 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ABCA1O95477 AL138799.1-201ENST00000448213 1675 ntBASIC12.72□□□□□ -0.37
ABCA1O95477 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ABCA1O95477 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ABCA1O95477 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ABCA1O95477 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ABCA1O95477 IGF1-203ENST00000392904 761 ntTSL 5 BASIC12.72□□□□□ -0.37
ABCA1O95477 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ABCA1O95477 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.72□□□□□ -0.37
ABCA1O95477 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.72□□□□□ -0.37
ABCA1O95477 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC12.72□□□□□ -0.37
ABCA1O95477 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ABCA1O95477 AC126915.1-201ENST00000522847 1038 ntBASIC12.72□□□□□ -0.37
ABCA1O95477 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.72□□□□□ -0.37
ABCA1O95477 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.72□□□□□ -0.37
ABCA1O95477 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC12.72□□□□□ -0.37
ABCA1O95477 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC12.72□□□□□ -0.37
ABCA1O95477 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.72□□□□□ -0.37
ABCA1O95477 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.72□□□□□ -0.37
ABCA1O95477 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ABCA1O95477 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
ABCA1O95477 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ABCA1O95477 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.71□□□□□ -0.37
ABCA1O95477 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ABCA1O95477 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.71□□□□□ -0.37
ABCA1O95477 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
ABCA1O95477 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.71□□□□□ -0.37
ABCA1O95477 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
ABCA1O95477 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.71□□□□□ -0.37
ABCA1O95477 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ABCA1O95477 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ABCA1O95477 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ABCA1O95477 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ABCA1O95477 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ABCA1O95477 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ABCA1O95477 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ABCA1O95477 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ABCA1O95477 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ABCA1O95477 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.71□□□□□ -0.37
ABCA1O95477 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ABCA1O95477 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ABCA1O95477 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.71□□□□□ -0.37
ABCA1O95477 PPY2P-201ENST00000582808 702 ntBASIC12.71□□□□□ -0.37
ABCA1O95477 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ABCA1O95477 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.71□□□□□ -0.37
ABCA1O95477 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
ABCA1O95477 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ABCA1O95477 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ABCA1O95477 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ABCA1O95477 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ABCA1O95477 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.71□□□□□ -0.37
ABCA1O95477 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ABCA1O95477 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ABCA1O95477 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ABCA1O95477 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.71□□□□□ -0.38
ABCA1O95477 AC009090.5-201ENST00000624886 2285 ntBASIC12.71□□□□□ -0.38
ABCA1O95477 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ABCA1O95477 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ABCA1O95477 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.71□□□□□ -0.38
ABCA1O95477 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
ABCA1O95477 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ABCA1O95477 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
ABCA1O95477 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.71□□□□□ -0.38
ABCA1O95477 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC12.71□□□□□ -0.38
ABCA1O95477 AC092978.1-202ENST00000637590 1327 ntBASIC12.71□□□□□ -0.38
ABCA1O95477 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.71□□□□□ -0.38
ABCA1O95477 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ABCA1O95477 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ABCA1O95477 CYP46A4P-201ENST00000414953 267 ntBASIC12.71□□□□□ -0.38
ABCA1O95477 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.71□□□□□ -0.38
ABCA1O95477 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ABCA1O95477 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC12.71□□□□□ -0.38
ABCA1O95477 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms