Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
ZNF253O75346 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.86□□□□□ -0.51
ZNF253O75346 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.86□□□□□ -0.51
ZNF253O75346 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
ZNF253O75346 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
ZNF253O75346 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC11.86□□□□□ -0.51
ZNF253O75346 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.86□□□□□ -0.51
ZNF253O75346 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
ZNF253O75346 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.86□□□□□ -0.51
ZNF253O75346 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
ZNF253O75346 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC11.86□□□□□ -0.51
ZNF253O75346 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.86□□□□□ -0.51
ZNF253O75346 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZNF253O75346 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.86□□□□□ -0.51
ZNF253O75346 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
ZNF253O75346 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.85□□□□□ -0.51
ZNF253O75346 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.85□□□□□ -0.51
ZNF253O75346 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
ZNF253O75346 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
ZNF253O75346 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
ZNF253O75346 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
ZNF253O75346 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
ZNF253O75346 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.85□□□□□ -0.51
ZNF253O75346 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC11.85□□□□□ -0.51
ZNF253O75346 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.85□□□□□ -0.51
ZNF253O75346 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.85□□□□□ -0.51
ZNF253O75346 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.85□□□□□ -0.51
ZNF253O75346 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.85□□□□□ -0.51
ZNF253O75346 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.85□□□□□ -0.51
ZNF253O75346 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
ZNF253O75346 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC11.85□□□□□ -0.51
ZNF253O75346 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
ZNF253O75346 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.85□□□□□ -0.51
ZNF253O75346 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.85□□□□□ -0.51
ZNF253O75346 AL592309.1-201ENST00000443127 649 ntBASIC11.85□□□□□ -0.51
ZNF253O75346 TIMM8BP1-201ENST00000452384 211 ntBASIC11.85□□□□□ -0.51
ZNF253O75346 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
ZNF253O75346 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 C20orf181-201ENST00000623918 480 ntBASIC11.85□□□□□ -0.51
ZNF253O75346 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
ZNF253O75346 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 AC004899.2-201ENST00000622993 3860 ntBASIC11.85□□□□□ -0.51
ZNF253O75346 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.85□□□□□ -0.51
ZNF253O75346 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 AC118758.2-201ENST00000614242 2813 ntBASIC11.85□□□□□ -0.51
ZNF253O75346 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
ZNF253O75346 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC11.85□□□□□ -0.51
ZNF253O75346 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
ZNF253O75346 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
ZNF253O75346 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.85□□□□□ -0.51
ZNF253O75346 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
ZNF253O75346 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZNF253O75346 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ZNF253O75346 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF253O75346 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.84□□□□□ -0.51
ZNF253O75346 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF253O75346 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.84□□□□□ -0.51
ZNF253O75346 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZNF253O75346 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms