Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA1FO60840 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CACNA1FO60840 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA1FO60840 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.59■□□□□ 0.57
CACNA1FO60840 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.59■□□□□ 0.57
CACNA1FO60840 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA1FO60840 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CACNA1FO60840 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.59■□□□□ 0.57
CACNA1FO60840 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC18.59■□□□□ 0.57
CACNA1FO60840 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.59■□□□□ 0.57
CACNA1FO60840 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.59■□□□□ 0.57
CACNA1FO60840 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.59■□□□□ 0.57
CACNA1FO60840 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA1FO60840 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.59■□□□□ 0.57
CACNA1FO60840 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC18.59■□□□□ 0.57
CACNA1FO60840 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
CACNA1FO60840 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CACNA1FO60840 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CACNA1FO60840 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CACNA1FO60840 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CACNA1FO60840 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.58■□□□□ 0.57
CACNA1FO60840 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CACNA1FO60840 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CACNA1FO60840 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CACNA1FO60840 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CACNA1FO60840 KRT8P29-201ENST00000420409 1371 ntBASIC18.58■□□□□ 0.57
CACNA1FO60840 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CACNA1FO60840 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CACNA1FO60840 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CACNA1FO60840 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CACNA1FO60840 RPL18P13-201ENST00000478088 569 ntBASIC18.58■□□□□ 0.56
CACNA1FO60840 MIR3615-201ENST00000581999 87 ntBASIC18.58■□□□□ 0.56
CACNA1FO60840 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CACNA1FO60840 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CACNA1FO60840 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CACNA1FO60840 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CACNA1FO60840 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CACNA1FO60840 WARS-203ENST00000358655 2466 ntTSL 2 BASIC18.58■□□□□ 0.56
CACNA1FO60840 FES-203ENST00000394302 2133 ntTSL 5 BASIC18.58■□□□□ 0.56
CACNA1FO60840 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CACNA1FO60840 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CACNA1FO60840 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.57■□□□□ 0.56
CACNA1FO60840 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 SLC16A6P1-201ENST00000413214 1059 ntBASIC18.57■□□□□ 0.56
CACNA1FO60840 EIF4HP1-201ENST00000453115 687 ntBASIC18.57■□□□□ 0.56
CACNA1FO60840 AKR7A2P1-201ENST00000460134 915 ntBASIC18.57■□□□□ 0.56
CACNA1FO60840 OARD1-204ENST00000464633 717 ntTSL 2 BASIC18.57■□□□□ 0.56
CACNA1FO60840 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
CACNA1FO60840 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC18.57■□□□□ 0.56
CACNA1FO60840 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC18.57■□□□□ 0.56
CACNA1FO60840 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC18.57■□□□□ 0.56
CACNA1FO60840 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC18.57■□□□□ 0.56
CACNA1FO60840 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.57■□□□□ 0.56
CACNA1FO60840 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CACNA1FO60840 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.57■□□□□ 0.56
CACNA1FO60840 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
CACNA1FO60840 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
CACNA1FO60840 DEF8-202ENST00000418391 852 ntTSL 2 BASIC18.57■□□□□ 0.56
CACNA1FO60840 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 AC100827.2-201ENST00000563214 1194 ntBASIC18.57■□□□□ 0.56
CACNA1FO60840 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.57■□□□□ 0.56
CACNA1FO60840 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.57■□□□□ 0.56
CACNA1FO60840 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CACNA1FO60840 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CACNA1FO60840 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CACNA1FO60840 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CACNA1FO60840 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.56■□□□□ 0.56
CACNA1FO60840 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC18.56■□□□□ 0.56
CACNA1FO60840 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CACNA1FO60840 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC18.56■□□□□ 0.56
CACNA1FO60840 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CACNA1FO60840 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CACNA1FO60840 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CACNA1FO60840 RNA5SP359-201ENST00000364838 113 ntBASIC18.56■□□□□ 0.56
CACNA1FO60840 HIST2H2BC-201ENST00000498492 580 ntBASIC18.56■□□□□ 0.56
CACNA1FO60840 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.56■□□□□ 0.56
CACNA1FO60840 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CACNA1FO60840 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CACNA1FO60840 AC136759.1-202ENST00000530858 2194 ntBASIC18.56■□□□□ 0.56
CACNA1FO60840 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC18.56■□□□□ 0.56
CACNA1FO60840 TUBBP5-203ENST00000508529 1334 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms