Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LCMT2O60294 KRT17P8-201ENST00000540749 863 ntBASIC14.44□□□□□ -0.1
LCMT2O60294 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LCMT2O60294 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.44□□□□□ -0.1
LCMT2O60294 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.44□□□□□ -0.1
LCMT2O60294 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.44□□□□□ -0.1
LCMT2O60294 AL162274.1-201ENST00000617191 1098 ntBASIC14.44□□□□□ -0.1
LCMT2O60294 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
LCMT2O60294 AC018442.1-201ENST00000421439 2061 ntBASIC14.44□□□□□ -0.1
LCMT2O60294 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCMT2O60294 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.44□□□□□ -0.1
LCMT2O60294 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LCMT2O60294 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LCMT2O60294 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCMT2O60294 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.44□□□□□ -0.1
LCMT2O60294 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.44□□□□□ -0.1
LCMT2O60294 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.44□□□□□ -0.1
LCMT2O60294 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.43□□□□□ -0.1
LCMT2O60294 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.43□□□□□ -0.1
LCMT2O60294 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.43□□□□□ -0.1
LCMT2O60294 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LCMT2O60294 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.43□□□□□ -0.1
LCMT2O60294 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LCMT2O60294 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.43□□□□□ -0.1
LCMT2O60294 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 AC106886.1-201ENST00000568660 600 ntBASIC14.43□□□□□ -0.1
LCMT2O60294 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LCMT2O60294 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.43□□□□□ -0.1
LCMT2O60294 ENPP7P14-201ENST00000621765 1040 ntBASIC14.43□□□□□ -0.1
LCMT2O60294 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LCMT2O60294 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LCMT2O60294 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LCMT2O60294 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LCMT2O60294 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 AC067930.6-201ENST00000623257 4947 ntBASIC14.43□□□□□ -0.1
LCMT2O60294 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LCMT2O60294 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LCMT2O60294 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LCMT2O60294 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.43□□□□□ -0.1
LCMT2O60294 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LCMT2O60294 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LCMT2O60294 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LCMT2O60294 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
LCMT2O60294 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LCMT2O60294 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.42□□□□□ -0.1
LCMT2O60294 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LCMT2O60294 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LCMT2O60294 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.42□□□□□ -0.1
LCMT2O60294 LINC01101-201ENST00000622953 1884 ntBASIC14.42□□□□□ -0.1
LCMT2O60294 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
LCMT2O60294 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.42□□□□□ -0.1
LCMT2O60294 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
LCMT2O60294 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LCMT2O60294 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
LCMT2O60294 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LCMT2O60294 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LCMT2O60294 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.42□□□□□ -0.1
LCMT2O60294 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LCMT2O60294 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.42□□□□□ -0.1
LCMT2O60294 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LCMT2O60294 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LCMT2O60294 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.42□□□□□ -0.1
LCMT2O60294 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.42□□□□□ -0.1
LCMT2O60294 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.42□□□□□ -0.1
LCMT2O60294 RN7SL48P-201ENST00000579283 293 ntBASIC14.42□□□□□ -0.1
LCMT2O60294 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.42□□□□□ -0.1
LCMT2O60294 AL512343.1-201ENST00000605837 169 ntBASIC14.42□□□□□ -0.1
LCMT2O60294 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.42□□□□□ -0.1
LCMT2O60294 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LCMT2O60294 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LCMT2O60294 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
LCMT2O60294 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LCMT2O60294 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LCMT2O60294 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LCMT2O60294 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LCMT2O60294 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LCMT2O60294 AC007686.3-201ENST00000619017 3487 ntBASIC14.42□□□□□ -0.1
LCMT2O60294 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
LCMT2O60294 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LCMT2O60294 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.42□□□□□ -0.1
LCMT2O60294 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms