Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.96■□□□□ 0.47
FOXN1O15353 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXN1O15353 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FOXN1O15353 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXN1O15353 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXN1O15353 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.95■□□□□ 0.46
FOXN1O15353 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXN1O15353 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
FOXN1O15353 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 AL109954.1-202ENST00000564051 2148 ntBASIC17.95■□□□□ 0.46
FOXN1O15353 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.95■□□□□ 0.46
FOXN1O15353 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
FOXN1O15353 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC17.95■□□□□ 0.46
FOXN1O15353 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.95■□□□□ 0.46
FOXN1O15353 AL627231.1-201ENST00000394467 1125 ntBASIC17.95■□□□□ 0.46
FOXN1O15353 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXN1O15353 AL354877.1-201ENST00000424412 413 ntBASIC17.95■□□□□ 0.46
FOXN1O15353 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.95■□□□□ 0.46
FOXN1O15353 ISCA2P1-201ENST00000425548 448 ntBASIC17.95■□□□□ 0.46
FOXN1O15353 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXN1O15353 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXN1O15353 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.95■□□□□ 0.46
FOXN1O15353 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
FOXN1O15353 RN7SL48P-201ENST00000579283 293 ntBASIC17.95■□□□□ 0.46
FOXN1O15353 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.95■□□□□ 0.46
FOXN1O15353 AL023803.2-201ENST00000620080 638 ntBASIC17.95■□□□□ 0.46
FOXN1O15353 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
FOXN1O15353 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 AC091951.1-201ENST00000512854 2465 ntBASIC17.95■□□□□ 0.46
FOXN1O15353 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXN1O15353 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 TMBIM7P-203ENST00000641617 1718 ntBASIC17.95■□□□□ 0.46
FOXN1O15353 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.95■□□□□ 0.46
FOXN1O15353 AC087481.3-201ENST00000602886 1894 ntBASIC17.95■□□□□ 0.46
FOXN1O15353 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN1O15353 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXN1O15353 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXN1O15353 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.94■□□□□ 0.46
FOXN1O15353 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXN1O15353 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXN1O15353 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXN1O15353 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
FOXN1O15353 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
FOXN1O15353 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXN1O15353 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
FOXN1O15353 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXN1O15353 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXN1O15353 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXN1O15353 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXN1O15353 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXN1O15353 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXN1O15353 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 AP001002.3-201ENST00000623482 206 ntBASIC17.94■□□□□ 0.46
FOXN1O15353 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 TBC1D3J-201ENST00000620719 1426 ntBASIC17.94■□□□□ 0.46
FOXN1O15353 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.94■□□□□ 0.46
FOXN1O15353 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXN1O15353 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
FOXN1O15353 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
FOXN1O15353 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN1O15353 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXN1O15353 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXN1O15353 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.93■□□□□ 0.46
FOXN1O15353 AC112693.3-201ENST00000624819 1983 ntBASIC17.93■□□□□ 0.46
FOXN1O15353 AL121723.1-201ENST00000445194 1519 ntBASIC17.93■□□□□ 0.46
FOXN1O15353 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms