Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC188H7C350 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC188H7C350 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC188H7C350 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCDC188H7C350 AL512361.1-201ENST00000554200 418 ntBASIC15.72■□□□□ 0.11
CCDC188H7C350 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC188H7C350 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CCDC188H7C350 AC004461.2-201ENST00000629517 803 ntBASIC15.72■□□□□ 0.11
CCDC188H7C350 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC188H7C350 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC188H7C350 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCDC188H7C350 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC188H7C350 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC188H7C350 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC188H7C350 AC126335.2-201ENST00000623362 4637 ntBASIC15.72■□□□□ 0.11
CCDC188H7C350 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC188H7C350 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC188H7C350 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC188H7C350 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC188H7C350 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC188H7C350 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC188H7C350 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCDC188H7C350 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC188H7C350 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC188H7C350 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC188H7C350 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC188H7C350 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC188H7C350 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC188H7C350 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 AC093525.8-201ENST00000624099 1342 ntBASIC15.71■□□□□ 0.11
CCDC188H7C350 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC188H7C350 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC188H7C350 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCDC188H7C350 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC188H7C350 HLA-K-203ENST00000430151 1046 ntBASIC15.71■□□□□ 0.11
CCDC188H7C350 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC188H7C350 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC188H7C350 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC188H7C350 GAPDHP40-201ENST00000505218 1006 ntBASIC15.71■□□□□ 0.11
CCDC188H7C350 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC188H7C350 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC188H7C350 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC188H7C350 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC188H7C350 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC188H7C350 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.71■□□□□ 0.1
CCDC188H7C350 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
CCDC188H7C350 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CCDC188H7C350 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC188H7C350 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC188H7C350 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC188H7C350 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC188H7C350 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC188H7C350 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC188H7C350 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC188H7C350 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC188H7C350 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CCDC188H7C350 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CCDC188H7C350 AL645937.2-201ENST00000396808 931 ntBASIC15.7■□□□□ 0.1
CCDC188H7C350 MIR940-201ENST00000401276 94 ntBASIC15.7■□□□□ 0.1
CCDC188H7C350 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC188H7C350 HLA-V-204ENST00000476601 1289 ntBASIC15.7■□□□□ 0.1
CCDC188H7C350 RN7SL618P-201ENST00000477850 296 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms