Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 GALNT15-201ENST00000339732 4669 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 HAUS4P1-201ENST00000406739 1145 ntBASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 TSPY17P-201ENST00000450329 467 ntBASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 AC020765.3-201ENST00000613051 740 ntBASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 ZNF566-204ENST00000434377 5197 ntAPPRIS P3 TSL 2 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 MTSS1-205ENST00000518547 4944 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHKB-CPT1BH3BT56 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 AC010969.2-201ENST00000602458 3231 ntBASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 AL022323.5-201ENST00000624101 2059 ntBASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 CACNA1E-201ENST00000357570 7064 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 ZKSCAN1-206ENST00000620510 9192 ntTSL 5 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 BAG5-203ENST00000445922 4867 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 MPP2-202ENST00000377184 4206 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 CRYGFP-201ENST00000418459 633 ntBASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms