Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 KRT18P43-201ENST00000469825 1281 ntBASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 RNA5SP419-201ENST00000515908 135 ntBASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 AL445228.2-201ENST00000605589 952 ntBASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 AC091812.2-201ENST00000619081 385 ntBASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
TRDV1A0A1B0GX56 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 NUTM2HP-201ENST00000442076 2498 ntBASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 AC015922.1-201ENST00000421102 1152 ntBASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 AC034105.1-201ENST00000563488 319 ntBASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 AC145285.3-201ENST00000564603 959 ntBASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms